RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 ANAPC10Q9UM13 185 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
UPK3BP1-201ENST00000428678 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
UPK3BP1-201ENST00000428678 HRH1P35367 487 aa13.19□□□□□ -0.3
UPK3BP1-201ENST00000428678 P2RY1P47900 373 aa13.19□□□□□ -0.3
UPK3BP1-201ENST00000428678 NAT1P18440 290 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 HLA-DMAP28067 261 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 PPP5CP53041 499 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 TAS2R20P59543 309 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 IZUMO4Q1ZYL8 232 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 NARS2Q96I59 477 aaKnown RBP13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 SCRT1Q9BWW7 348 aa13.18□□□□□ -0.3
UPK3BP1-201ENST00000428678 CRYBB3P26998 211 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 TSPAN5P62079 268 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 RAB26Q9ULW5 256 aa13.17□□□□□ -0.3
UPK3BP1-201ENST00000428678 NPY1RP25929 384 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 PRSS3P35030 304 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 DHRS2Q13268 280 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 LGALS9BQ3B8N2 356 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 RAB40CQ96S21 281 aa13.16□□□□□ -0.3
UPK3BP1-201ENST00000428678 CLN5O75503 358 aa13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 IFNA17P01571 189 aa13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 SUB1P53999 127 aaKnown RBP eCLIP13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 LYSMD2Q8IV50 215 aa13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 SAMD12Q8N8I0 201 aa13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 MRPL36Q9P0J6 103 aaKnown RBP13.15□□□□□ -0.3
UPK3BP1-201ENST00000428678 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 HELTA6NFD8 242 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 CORTO00230 105 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 TMEM127O75204 238 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 IFNA10P01566 189 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 OPRK1P41145 380 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
UPK3BP1-201ENST00000428678 IFNA21P01568 189 aa13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 RNASE2P10153 161 aaKnown RBP13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 TIGITQ495A1 244 aa13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 ZNF575Q86XF7 245 aa13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 PDCD10Q9BUL8 212 aa13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
UPK3BP1-201ENST00000428678 A0A0B4J293 547 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 AKR1C2P52895 323 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 MLANAQ16655 118 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 KRTAP4-5Q9BYR2 181 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
UPK3BP1-201ENST00000428678 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 TGFBR1P36897 503 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 ETV6P41212 452 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 EMP1P54849 157 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 UCP3P55916 312 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 NEDD8Q15843 81 aa13.11□□□□□ -0.31
UPK3BP1-201ENST00000428678 SPART-AS1P0CW21 52 aa13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 SNRPD3P62318 126 aaKnown RBP13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 GPX8Q8TED1 209 aa13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
UPK3BP1-201ENST00000428678 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 CD74P04233 296 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 P0C879 139 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 PGAM2P15259 253 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 RPL5P46777 297 aaKnown RBP13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 Q6ZR54 194 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 U3KQE9 123 aa13.09□□□□□ -0.31
UPK3BP1-201ENST00000428678 H3BMM0 161 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 ATG12O94817 140 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 PI3P19957 117 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 RCVRNP35243 200 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 Q6ZRM9 215 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 Q8WTZ3 238 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
UPK3BP1-201ENST00000428678 HSPG2P98160 4391 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 RPS10-NUDT3A0A1W2PQS6 291 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 TMEM189A5PLL7 270 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 M0QYG6 137 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms