RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 OR4D10Q8NGI6 311 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 PHLDA1Q8WV24 401 aaPredicted RBP13.01□□□□□ -0.33
GPC1-203ENST00000425056 RARRES2Q99969 163 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 PDCD10Q9BUL8 212 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 MS4A6AQ9H2W1 248 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 EXTL2Q9UBQ6 330 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 KMT2AQ03164 3969 aa13□□□□□ -0.33
GPC1-203ENST00000425056 TMEM50AO95807 157 aa13□□□□□ -0.33
GPC1-203ENST00000425056 CD74P04233 296 aa13□□□□□ -0.33
GPC1-203ENST00000425056 UCP1P25874 307 aa13□□□□□ -0.33
GPC1-203ENST00000425056 HOXA1P49639 335 aaPredicted RBP13□□□□□ -0.33
GPC1-203ENST00000425056 SUB1P53999 127 aaKnown RBP eCLIP13□□□□□ -0.33
GPC1-203ENST00000425056 TRIM16LQ309B1 348 aa13□□□□□ -0.33
GPC1-203ENST00000425056 BSXQ3C1V8 233 aa13□□□□□ -0.33
GPC1-203ENST00000425056 OR13C8Q8NGS7 320 aa13□□□□□ -0.33
GPC1-203ENST00000425056 TERB2Q8NHR7 220 aa13□□□□□ -0.33
GPC1-203ENST00000425056 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
GPC1-203ENST00000425056 ABHD1Q96SE0 405 aa13□□□□□ -0.33
GPC1-203ENST00000425056 FNDC4Q9H6D8 234 aaPredicted RBP13□□□□□ -0.33
GPC1-203ENST00000425056 COPZ2Q9P299 210 aa13□□□□□ -0.33
GPC1-203ENST00000425056 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 B3GALNT1O75752 331 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 SP6Q3SY56 376 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 AARDQ4LEZ3 155 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 C15orf40Q8WUR7 153 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 MRPL36Q9P0J6 103 aaKnown RBP12.99□□□□□ -0.33
GPC1-203ENST00000425056 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
GPC1-203ENST00000425056 IGHV3-66A0A0C4DH42 116 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 DNASE2O00115 360 aaPredicted RBP12.98□□□□□ -0.33
GPC1-203ENST00000425056 CLN5O75503 358 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
GPC1-203ENST00000425056 OPRK1P41145 380 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 ETV6P41212 452 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 TAS2R19P59542 299 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 DEFB131AP59861 70 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 FAM24BQ8N5W8 94 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 RRNAD1Q96FB5 475 aaKnown RBP12.98□□□□□ -0.33
GPC1-203ENST00000425056 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
GPC1-203ENST00000425056 RAB3DO95716 219 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 NPPCP23582 126 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 SCGB2B2Q4G0G5 96 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 LEMD1Q68G75 181 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 STEAP1BQ6NZ63 245 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 FAM219AQ8IW50 185 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 RNASE11Q8TAA1 199 aaKnown RBP12.97□□□□□ -0.33
GPC1-203ENST00000425056 MARCH1Q8TCQ1 289 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 SLIRPQ9GZT3 109 aaKnown RBP12.97□□□□□ -0.33
GPC1-203ENST00000425056 MFFQ9GZY8 342 aa12.97□□□□□ -0.33
GPC1-203ENST00000425056 A0A1W2PS18 150 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 GABARAPH6UMI1 98 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 CRYBB3P26998 211 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 SPCS3P61009 180 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 RPL11P62913 178 aaKnown RBP12.96□□□□□ -0.33
GPC1-203ENST00000425056 SSBP1Q04837 148 aaKnown RBP12.96□□□□□ -0.33
GPC1-203ENST00000425056 Q6ZRM9 215 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 METTL26Q96S19 204 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 TMEM222Q9H0R3 208 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 RABAC1Q9UI14 185 aa12.96□□□□□ -0.33
GPC1-203ENST00000425056 K7EQG2 157 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 CDS2O95674 445 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 OR5AC1P0C628 307 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 NANOS2P60321 138 aaKnown RBP12.95□□□□□ -0.34
GPC1-203ENST00000425056 TMEM187Q14656 261 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 MLANAQ16655 118 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 LGALS9CQ6DKI2 356 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 MCFD2Q8NI22 146 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 MIXL1Q9H2W2 232 aa12.95□□□□□ -0.34
GPC1-203ENST00000425056 AGRNO00468 2067 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 HTR2BP41595 481 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 P2RY1P47900 373 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 MRPS10P82664 201 aaKnown RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 MEF2DQ14814 521 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 SURF2Q15527 256 aaPredicted RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 STHQ8IWL8 128 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 RPP25LQ8N5L8 163 aaKnown RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 LHFPL5Q8TAF8 219 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
GPC1-203ENST00000425056 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
GPC1-203ENST00000425056 TRAV30A0A087WSZ9 112 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 RPS10-NUDT3A0A1W2PQS6 291 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 RGS5O15539 181 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 CNPY1Q3B7I2 92 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
GPC1-203ENST00000425056 STXBP6Q8NFX7 210 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 SMIM4Q8WVI0 70 aa12.93□□□□□ -0.34
GPC1-203ENST00000425056 TMEM230Q96A57 120 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms