RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MSMO1Q15800 293 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IAH1Q2TAA2 248 aaPredicted RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TIGITQ495A1 244 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 MPV17L2Q567V2 206 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CPTPQ5TA50 214 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 FAM78BQ5VT40 261 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TRIM40Q6P9F5 258 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SLC25A34Q6PIV7 304 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SBSNQ6UWP8 590 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 GTF2H5Q6ZYL4 71 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM5Q71RC9 77 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 DPY19L4Q7Z388 723 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NECAP1Q8NC96 275 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OR5A1Q8NGJ0 315 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OR6N2Q8NGY6 317 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OR2T10Q8NGZ9 312 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 FAM213BQ8TBF2 198 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 FGF13Q92913 245 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM230Q96A57 120 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 BTF3L4Q96K17 158 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NPY6RQ99463 290 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 GPER1Q99527 375 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 AGMATQ9BSE5 352 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 WDR61Q9GZS3 305 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NXF5Q9H1B4 397 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SH3BGRL3Q9H299 93 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM133Q9H2Q1 129 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 LYRM4Q9HD34 91 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SPANXB1Q9NS25 103 aaPredicted RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OR1A1Q9P1Q5 309 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NXT1Q9UKK6 140 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TRAPPC2LQ9UL33 140 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 RCL1Q9Y2P8 373 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 LINC00312Q9Y6C7 94 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 V9GY05 133 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CACNA1AO00555 2505 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 THADAQ6YHU6 1953 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SCN3AQ9NY46 2000 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TNS1Q9HBL0 1735 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 IGLV2-18A0A075B6J9 118 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 BORCS7-ASMTA0A0B4J1R7 106 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TRAV1-1A0A0B4J248 108 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 A0A1B0GV50 99 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 DAPL1A0PJW8 107 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 PRSS37A4D1T9 235 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF736B4DX44 427 aaPredicted RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 LOC730098B7Z3J9 87 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF878C9JN71 531 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 F2Z2F3 143 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 H0YJW9 148 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 H3BRM9 83 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 J3QLW9 94 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 K7ENP7 123 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 FCN1O00602 326 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SLC31A1O15431 190 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF207O43670 478 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 DUX1O43812 170 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SCGB2A1O75556 95 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 DEDDO75618 318 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 EPPINO95925 133 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 HLA-HP01893 362 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 HLA-DRB1P01911 266 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 PRH1P02810 166 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SERPINE2P07093 398 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 GPX1P07203 203 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 C3orf79P0CE67 100 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SLC25A6P12236 298 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 IL9P15248 144 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 IGLL1P15814 213 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ATP6V0CP27449 155 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 GRPRP30550 384 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 OPRM1P35372 400 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF93P35789 620 aaPredicted RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 GPR1P46091 355 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 STC1P52823 247 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM11AP58511 58 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TAS2R31P59538 309 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 KRTDAPP60985 99 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 RPL23P62829 140 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 RPL8P62917 257 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SUPT4H1P63272 117 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 LCN2P80188 198 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 MEF2CQ06413 473 aaPredicted RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 FUT7Q11130 342 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 OR1Q1Q15612 314 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TNXAQ16473 311 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 HLA-DRB5Q30154 266 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 GGTA1PQ4G0N0 100 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TCEAL5Q5H9L2 206 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 FAM162BQ5T6X4 162 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 NOXRED1Q6NXP6 359 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 MRPL54Q6P161 138 aaKnown RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 WDR74Q6RFH5 385 aaPredicted RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 LCN15Q6UWW0 184 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM184AQ6ZMB5 413 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 STAC2Q6ZMT1 411 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 CYP2G1PQ6ZSU1 146 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms