RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SPAG16Q8N0X2 631 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 Q8N814 137 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 SMIM19Q96E16 107 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 ARHGAP5-AS1Q96IT6 56 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 TMEM56Q96MV1 263 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 CIB1Q99828 191 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 CABLES2Q9BTV7 478 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 TMEM140Q9NV12 185 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 CLEC2DQ9UHP7 191 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 LY96Q9Y6Y9 160 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 TEX50A0A1B0GTY4 177 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 A0A1B0GU03 582 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-203ENST00000424270 SNAPC5O75971 98 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 INSP01308 110 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 FCGR3AP08637 254 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 NQO2P16083 231 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 POLR2IP36954 125 aaKnown RBP4.27□□□□□ -1.73
SDCBP-203ENST00000424270 NKX2-1P43699 371 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-203ENST00000424270 ID3Q02535 119 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 UNC119Q13432 240 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 FOXI2Q6ZQN5 318 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 H1FOOQ8IZA3 346 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-203ENST00000424270 ZFP41Q8N8Y5 198 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 ZNF709Q8N972 641 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 TSPAN14Q8NG11 270 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 OR13F1Q8NGS4 319 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 TRUB1Q8WWH5 349 aaKnown RBP4.27□□□□□ -1.73
SDCBP-203ENST00000424270 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 PECRQ9BY49 303 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 SCPEP1Q9HB40 452 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 AMBNQ9NP70 447 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 OR51B2Q9Y5P1 312 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
SDCBP-203ENST00000424270 A0A0A6YYD4 124 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 SULT1C2O00338 296 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 OGG1O15527 345 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 NFYAP23511 347 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 CRYBB3P26998 211 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 MAPK3P27361 379 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 TAS2R31P59538 309 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 VAMP2P63027 116 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 CD300CQ08708 224 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 CATR1Q13166 79 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 P2RY14Q15391 338 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 ACOT6Q3I5F7 207 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 ANKRD39Q53RE8 183 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 FAM78BQ5VT40 261 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 KDM4DQ6B0I6 523 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 SFXN4Q6P4A7 337 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 SIGLEC15Q6ZMC9 328 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 TMED4Q7Z7H5 227 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 BPIFB6Q8NFQ5 453 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 OR1P1Q8NH06 330 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 PGLYRP3Q96LB9 341 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 IGF2BP2-AS1Q96M15 143 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 LINC01587Q99440 93 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 DCSTAMPQ9H295 470 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 PLGRKTQ9HBL7 147 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 NOP10Q9NPE3 64 aaKnown RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 OR2W1Q9Y3N9 320 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 TIMM8BQ9Y5J9 83 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-203ENST00000424270 ORC6Q9Y5N6 252 aa4.26□□□□□ -1.73
SDCBP-203ENST00000424270 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-203ENST00000424270 A0A096LPF7 62 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 AQP12BA6NM10 295 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 I3L2K1 104 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 RGS13O14921 159 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 GAGE7O76087 117 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 DIRAS3O95661 229 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 HPRT1P00492 218 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 LALBAP00709 142 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 CDK1P06493 297 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 MYL12AP19105 171 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 B2MP61769 119 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 FLOT2Q14254 428 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 RAB11BQ15907 218 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 SPATA31B1PQ5VZV4 182 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 AQP12AQ8IXF9 295 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 OR56B1Q8NGI3 324 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM203Q969S6 136 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 C16orf74Q96GX8 76 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 LPAR5Q9H1C0 372 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 PPP1R14DQ9NXH3 145 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 BABAM2Q9NXR7 383 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 RABL2AQ9UBK7 228 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-203ENST00000424270 OAZ3Q9UMX2 235 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 NSG2Q9Y328 171 aa4.25□□□□□ -1.73
SDCBP-203ENST00000424270 TRAV5A0A0B4J249 113 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM14DPA8MWL7 114 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms