RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MFAP4P55083 255 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 Q56UQ5 140 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 NOXA1Q86UR1 476 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 UBAC2Q8NBM4 344 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-202ENST00000422544 CIB3Q96Q77 187 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-202ENST00000422544 FNDC4Q9H6D8 234 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-202ENST00000422544 PAIP2BQ9ULR5 123 aaKnown RBP7.12□□□□□ -1.27
PDGFC-202ENST00000422544 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 RYR2Q92736 4967 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 OR2T8A6NH00 312 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 F8W735 103 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 H3BP45 60 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 TMEM50AO95807 157 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 IGLL1P15814 213 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 ZP3P21754 424 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 PAX9P55771 341 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 SYNJ2BPP57105 145 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 DEFA6Q01524 100 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 IL15RAQ13261 267 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 KLF5Q13887 457 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 RPEL1Q2QD12 228 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 FAM209BQ5JX69 171 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 SPANXN5Q5MJ07 72 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 ACSM6Q6P461 480 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 RNASEH2CQ8TDP1 164 aaKnown RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 SMIM8Q96KF7 97 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 OR4C12Q96R67 309 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 PSENENQ9NZ42 101 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 MRPL36Q9P0J6 103 aaKnown RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 MGAT4CQ9UBM8 478 aa7.11□□□□□ -1.27
PDGFC-202ENST00000422544 LSM5Q9Y4Y9 91 aaKnown RBP7.11□□□□□ -1.27
PDGFC-202ENST00000422544 IGHV3-35A0A0C4DH35 117 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RPS10-NUDT3A0A1W2PQS6 291 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 K7EPK0 472 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 OVOL1O14753 267 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 TGOLN2O43493 480 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 LY86O95711 162 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 CTSGP08311 255 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 ATP5IP56385 69 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-202ENST00000422544 H2BFSP57053 126 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 S100A10P60903 97 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RAB11AP62491 216 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RAB32Q13637 225 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 BSCL2Q96G97 398 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RAB40CQ96S21 281 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 TXN2Q99757 166 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 CHRDL1Q9BU40 450 aa7.1□□□□□ -1.27
PDGFC-202ENST00000422544 RCL1Q9Y2P8 373 aaKnown RBP7.1□□□□□ -1.27
PDGFC-202ENST00000422544 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
PDGFC-202ENST00000422544 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 L7N2F9 121 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 NUPL2O15504 423 aaKnown RBP7.09□□□□□ -1.27
PDGFC-202ENST00000422544 GNG7O60262 68 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 CXCL3P19876 107 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
PDGFC-202ENST00000422544 ADMP35318 185 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 NPBWR1P48145 328 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 VAMP2P63027 116 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 CD69Q07108 199 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 FCN2Q15485 313 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 ETFRF1Q6IPR1 90 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 PRSS54Q6PEW0 395 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 SPSB3Q6PJ21 355 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 GPHB5Q86YW7 130 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 OR4X1Q8NH49 305 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 RCC1LQ96I51 464 aaKnown RBP7.09□□□□□ -1.27
PDGFC-202ENST00000422544 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 NMES1Q9C002 83 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 MED28Q9H204 178 aa7.09□□□□□ -1.27
PDGFC-202ENST00000422544 GAR1Q9NY12 217 aaKnown RBP7.09□□□□□ -1.27
PDGFC-202ENST00000422544 SEC14L6B5MCN3 397 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 G3V4G9 280 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 TSC22D2O75157 780 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 CLN5O75503 358 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 CCNKO75909 580 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 SLC25A4P12235 298 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 GPX4P36969 197 aaPredicted RBP7.08□□□□□ -1.28
PDGFC-202ENST00000422544 BCAP31P51572 246 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 RND2P52198 227 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 TAS2R30P59541 319 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 CYCSP99999 105 aaKnown RBP7.08□□□□□ -1.28
PDGFC-202ENST00000422544 LRRC37A5PQ49AS3 106 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 FAM106AQ4KMX7 169 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 TMEM14EPQ6UXP3 125 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 IL34Q6ZMJ4 242 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 C1QL4Q86Z23 238 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 OR11H7Q8NGC8 314 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 OR9G4Q8NGQ1 327 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 NPIPB3Q92617 1050 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 ACY3Q96HD9 319 aa7.08□□□□□ -1.28
PDGFC-202ENST00000422544 MCRIP2Q9BUT9 160 aaKnown RBP7.08□□□□□ -1.28
PDGFC-202ENST00000422544 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms