RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NPBWR1P48145 328 aa14.16□□□□□ -0.14
TRIM56-202ENST00000412507 RELQ04864 619 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-202ENST00000412507 MLANAQ16655 118 aa14.16□□□□□ -0.14
TRIM56-202ENST00000412507 FNDC4Q9H6D8 234 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-202ENST00000412507 TUBA4BQ9H853 241 aa14.16□□□□□ -0.14
TRIM56-202ENST00000412507 K7EMT4 169 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 YIF1AO95070 293 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 OPRK1P41145 380 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 HTR2BP41595 481 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 SMCO1Q147U7 214 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 RBMS2Q15434 407 aaKnown RBP14.15□□□□□ -0.14
TRIM56-202ENST00000412507 ANKRD55Q3KP44 614 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 RBPMS2Q6ZRY4 209 aaKnown RBP14.15□□□□□ -0.14
TRIM56-202ENST00000412507 CENPSQ8N2Z9 138 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 WFDC10AQ9H1F0 79 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 MRPL36Q9P0J6 103 aaKnown RBP14.15□□□□□ -0.14
TRIM56-202ENST00000412507 NBEAL2Q6ZNJ1 2754 aa14.15□□□□□ -0.14
TRIM56-202ENST00000412507 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 NAP1L6A6NFF2 107 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 C15orf62A8K5M9 175 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 TMEM50AO95807 157 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 PPP1R1AQ13522 171 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 DEFB125Q8N687 156 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 WWC2-AS2Q96NR7 200 aa14.14□□□□□ -0.15
TRIM56-202ENST00000412507 OR11H12B2RN74 326 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 SFT2D2O95562 160 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 IL7P13232 177 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 TNFRSF9Q07011 255 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 C2orf83Q53S99 150 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 SLC24A4Q8NFF2 622 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 OR52B4Q8NGK2 314 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 OR1S1Q8NH92 325 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 RCHY1Q96PM5 261 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 HIPK2Q9H2X6 1198 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 RBKSQ9H477 322 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 HSPB7Q9UBY9 170 aa14.13□□□□□ -0.15
TRIM56-202ENST00000412507 A0A1B0GU03 582 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 DUXBA0A1W2PPF3 345 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 CLN5O75503 358 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 SLC16A13Q7RTY0 426 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 LRTM2Q8N967 370 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 TMEM170AQ8WVE7 144 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 OR10C1Q96KK4 312 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 CCDC32Q9BV29 185 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 ZMAT4Q9H898 229 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 CACFD1Q9UGQ2 172 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 SMPXQ9UHP9 88 aa14.12□□□□□ -0.15
TRIM56-202ENST00000412507 IGHV3-49A0A0A0MS15 119 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 PIGBOS1A0A0B4J2F0 54 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 IGHV7-4-1A0A0J9YVY3 117 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 NDUFB6O95139 128 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 HAGHQ16775 308 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 TOMM20LQ6UXN7 152 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 ZNF600Q6ZNG1 722 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 TMEM116Q8NCL8 245 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 OR4X1Q8NH49 305 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 DTD1Q8TEA8 209 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 TM2D3Q9BRN9 247 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 SRD5A3Q9H8P0 318 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 FLVCR2Q9UPI3 526 aa14.11□□□□□ -0.15
TRIM56-202ENST00000412507 PUS1Q9Y606 427 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRIM56-202ENST00000412507 RPS10-NUDT3A0A1W2PQS6 291 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 CENPXA8MT69 81 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 TSPAN4O14817 238 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 NPY1RP25929 384 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 BTCP35070 178 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 UBE2MP61081 183 aaKnown RBP14.1□□□□□ -0.15
TRIM56-202ENST00000412507 LAMTOR1Q6IAA8 161 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 RNASEH2CQ8TDP1 164 aaKnown RBP14.1□□□□□ -0.15
TRIM56-202ENST00000412507 C7orf50Q9BRJ6 194 aaKnown RBP14.1□□□□□ -0.15
TRIM56-202ENST00000412507 RHPN1-AS1Q9BWJ2 59 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 ZFAND3Q9H8U3 227 aa14.1□□□□□ -0.15
TRIM56-202ENST00000412507 IGHV3OR16-13A0A075B7E8 117 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 TRAV14DV4A0A0A6YYC5 116 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 IGHV3-74A0A0B4J1X5 117 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 CHEK1O14757 476 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 PITX3O75364 302 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 IFNA10P01566 189 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 HOXB5P09067 269 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 LINC00322Q6ZN03 302 aaPredicted RBP14.09□□□□□ -0.15
TRIM56-202ENST00000412507 RNF2Q99496 336 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 SPAG8Q99932 426 aaPredicted RBP14.09□□□□□ -0.15
TRIM56-202ENST00000412507 GINS3Q9BRX5 216 aa14.09□□□□□ -0.15
TRIM56-202ENST00000412507 DNAH7Q8WXX0 4024 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 C9orf170A2RU37 121 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 RBMY1BA6NDE4 496 aaKnown RBP14.08□□□□□ -0.16
TRIM56-202ENST00000412507 RBMY1EA6NEQ0 496 aaKnown RBP14.08□□□□□ -0.16
TRIM56-202ENST00000412507 RBMY1DP0C7P1 496 aaKnown RBP14.08□□□□□ -0.16
TRIM56-202ENST00000412507 TIGITQ495A1 244 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 PRSS54Q6PEW0 395 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 NOXA1Q86UR1 476 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 TMED3Q9Y3Q3 217 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 U3KQ87 197 aa14.08□□□□□ -0.16
TRIM56-202ENST00000412507 PLA2G10O15496 165 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 SLC25A4P12235 298 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 SLC25A6P12236 298 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 RND2P52198 227 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 GGNBP1Q5YKI7 109 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 UBQLN2Q9UHD9 624 aa14.07□□□□□ -0.16
TRIM56-202ENST00000412507 TRAV30A0A087WSZ9 112 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms