RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 VDAC1P21796 283 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 G0S2P27469 103 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 PRDX2P32119 198 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 SAA4P35542 130 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 IER3P46695 156 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 OR3A4PP47883 348 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 CEBPDP49716 269 aaPredicted RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 PIGPP57054 158 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 RPL15P61313 204 aaKnown RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 RANP62826 216 aaKnown RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 AKIRIN2Q53H80 203 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 GFI1BQ5VTD9 330 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 NCR3LG1Q68D85 454 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 TET2Q6N021 2002 aaPredicted RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 SLC25A24Q6NUK1 477 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 C1orf122Q6ZSJ8 110 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 LYZL2Q7Z4W2 148 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 CALHM1Q8IU99 346 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 ODF3L1Q8IXM7 274 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 BATF2Q8N1L9 274 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 PNKDQ8N490 385 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 CD177Q8N6Q3 437 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 SLC35G3Q8N808 338 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 OR51T1Q8NGJ9 327 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 OR5D13Q8NGL4 314 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 NPRL2Q8WTW4 380 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 DYRK2Q92630 601 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 TNFRSF14Q92956 283 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 YPEL2Q96QA6 119 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 CABLES2Q9BTV7 478 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 SNHG12Q9BXW3 62 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 PKIBQ9C010 78 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 SLC2A9Q9NRM0 540 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 OR14J1Q9UGF5 321 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 LSM5Q9Y4Y9 91 aaKnown RBP4.25□□□□□ -1.73
LINC00342-201ENST00000412393 WNK1Q9H4A3 2382 aa4.25□□□□□ -1.73
LINC00342-201ENST00000412393 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 IGKV1D-8A0A087WSZ0 117 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 IGSF23A1L1A6 192 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 CLPSL1A2RUU4 121 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 SDCBPO00560 298 aaPredicted RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ANGPTL7O43827 346 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 TUSC2O75896 110 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 IFNA1P01562 189 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 REG1AP05451 166 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 RD3LP0DJH9 198 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 SERPINA2P20848 420 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 OR10J1P30954 320 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 NKX2-1P43699 371 aaPredicted RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 UBE2E1P51965 193 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 FUT6P51993 359 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 PAX9P55771 341 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 RPS20P60866 119 aaKnown RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ERVK11-1P61568 191 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 SELENOTP62341 195 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 RPL23AP62750 156 aaKnown RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 RPL31P62899 125 aaKnown RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 PAFAH1B2P68402 229 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 PAX5Q02548 391 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 CNN3Q15417 329 aaKnown RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 PLPPR1Q8TBJ4 325 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 LSM10Q969L4 123 aaKnown RBP4.24□□□□□ -1.73
LINC00342-201ENST00000412393 BORCS8Q96FH0 119 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ATP5SQ99766 215 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 TXNDC17Q9BRA2 123 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 TMEM208Q9BTX3 173 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 SH3BGRL3Q9H299 93 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 HES4Q9HCC6 221 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 Q9N2K0 584 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 OR6C3Q9NZP0 311 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 ZNRD1Q9P1U0 126 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 AK3Q9UIJ7 227 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 VPREB3Q9UKI3 123 aa4.24□□□□□ -1.73
LINC00342-201ENST00000412393 IGKV1-27A0A075B6S5 117 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 TRBV6-6A0A0A6YYG2 114 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 C3orf85A0A1B0GTC6 90 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 FAM90A26D6RGX4 464 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 KBTBD11O94819 623 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 DIRAS3O95661 229 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 CCL3L1P16619 93 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 COX7A1P24310 79 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 GNRHRP30968 328 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 EDDM3BP56851 147 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 HERPUD1Q15011 391 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 LRRC75BQ2VPJ9 315 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 MAJINQ3KP22 176 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 ABCA11PQ4W5N1 156 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 HCP5Q6MZN7 132 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
LINC00342-201ENST00000412393 Q6ZSV7 163 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 RNF144BQ7Z419 303 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms