RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR6K6Q8NGW6 343 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGFBPL1Q8WX77 278 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 AQP3Q92482 292 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 ZMYND19Q96E35 227 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 TVP23CQ96ET8 276 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 TBX15Q96SF7 602 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SIGMAR1Q99720 223 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 RSG1Q9BU20 258 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 MOB1AQ9H8S9 216 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 PATZ1Q9HBE1 687 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CMC2Q9NRP2 79 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 LHFPL6Q9Y693 200 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CHD3Q12873 2000 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 HIVEP1P15822 2718 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 ITPR3Q14573 2671 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 DSCAMO60469 2012 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 F8P00451 2351 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TEP1Q99973 2627 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 IGHV4-28A0A0C4DH34 117 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 IGSF23A1L1A6 192 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 C5orf63A6NC05 138 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 K7EN84 100 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ARL6IP5O75915 188 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 NGFP01138 241 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 IFNA5P01569 189 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 CTSDP07339 412 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 MRPL3P09001 348 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SRP19P09132 144 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TACSTD2P09758 323 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 CD34P28906 385 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 HTR1FP30939 366 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 RBMXP38159 391 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 MPV17P39210 176 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 OR12D2P58182 307 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 YPEL3P61236 119 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 EIF2B1Q14232 305 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF506Q5JVG8 444 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ACTL10Q5JWF8 245 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 LINC01590Q5TEZ4 76 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TMEM42Q69YG0 159 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SLC18B1Q6NT16 456 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SLC25A48Q6ZT89 311 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 Q6ZVQ6 151 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 C1orf174Q8IYL3 243 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ZDHHC22Q8N966 263 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TMEM229BQ8NBD8 167 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SUMF2Q8NBJ7 301 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 NUP37Q8NFH4 326 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 OR2Z1Q8NG97 314 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SLAMF6Q96DU3 332 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 SEH1LQ96EE3 360 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 S100A16Q96FQ6 103 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 BTF3L4Q96K17 158 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 PGLYRP3Q96LB9 341 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 FOXC2Q99958 501 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 VAMP8Q9BV40 100 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TTTY10Q9BZA0 68 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TAF9BQ9HBM6 251 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 TVP23BQ9NYZ1 205 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 MSRB1Q9NZV6 116 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 KLK11Q9UBX7 282 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 FLNAP21333 2647 aaKnown RBP3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ARID1AO14497 2285 aa3.68□□□□□ -1.82
SF3B1-202ENST00000409915 ZANQ9Y493 2812 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 RTTNQ86VV8 2226 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 HEATR1Q9H583 2144 aaKnown RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 A6NIN4 97 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 CEACAM18A8MTB9 384 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 F5H5K5 113 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 GEMIN2O14893 280 aaKnown RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 TAX1BP3O14907 124 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 AGPAT2O15120 278 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 PSG1P11464 419 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF823P16415 610 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 AKR1C4P17516 323 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 AZU1P20160 251 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 TSPOP30536 169 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 GABRA2P47869 451 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 RIPPLY3P57055 190 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 TAS2R20P59543 309 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 PCBD1P61457 104 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 PPP1CBP62140 327 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 HLA-DRB3P79483 266 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF92Q03936 586 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 LAGE3Q14657 143 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 UNQ5815/PRO19632Q6UWF5 114 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 FOXI2Q6ZQN5 318 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ODF3L1Q8IXM7 274 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 CIARTQ8N365 385 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 RFLNBQ8N5W9 214 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 DEFB125Q8N687 156 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF525Q8N782 197 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 Q8N976 141 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 MAPK1IP1LQ8NDC0 245 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms