RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TMEM88Q6PEY1 159 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 NEU1Q99519 415 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 NIPSNAP3BQ9BS92 247 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 VCXQ9H320 206 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 EHFQ9NZC4 300 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 KCTD21Q4G0X4 260 aa11.82□□□□□ -0.52
CHMP3-203ENST00000409225 ZNF705AQ6ZN79 300 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-203ENST00000409225 TMEM230Q96A57 120 aa11.82□□□□□ -0.52
CHMP3-203ENST00000409225 ZNF2Q9BSG1 426 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-203ENST00000409225 YTHDF1Q9BYJ9 559 aaKnown RBP11.82□□□□□ -0.52
CHMP3-203ENST00000409225 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
CHMP3-203ENST00000409225 RFNGQ9Y644 331 aa11.82□□□□□ -0.52
CHMP3-203ENST00000409225 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 ZNF705FA8MVS1 300 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-203ENST00000409225 H3BMM0 161 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 ZNF705DP0CH99 300 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-203ENST00000409225 ZNF705BP0CI00 300 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-203ENST00000409225 EIF2B2P49770 351 aaKnown RBP11.81□□□□□ -0.52
CHMP3-203ENST00000409225 FXYD7P58549 80 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 TBCEQ15813 527 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-203ENST00000409225 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
CHMP3-203ENST00000409225 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 RFX2P48378 723 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-203ENST00000409225 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
CHMP3-203ENST00000409225 SNRPD3P62318 126 aaKnown RBP11.8□□□□□ -0.52
CHMP3-203ENST00000409225 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 OR5H6Q8NGV6 325 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 FXYD6Q9H0Q3 95 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 AUNIPQ9H7T9 357 aa11.8□□□□□ -0.52
CHMP3-203ENST00000409225 MRPL36Q9P0J6 103 aaKnown RBP11.8□□□□□ -0.52
CHMP3-203ENST00000409225 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-203ENST00000409225 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 GPR31O00270 319 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 SNCAP37840 140 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 CBX5P45973 191 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 PHLDA2Q53GA4 152 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 IFT46Q9NQC8 304 aa11.79□□□□□ -0.52
CHMP3-203ENST00000409225 CLN5O75503 358 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 IGKV1-39P01597 117 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 PMP2P02689 132 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 IGKV1D-39P04432 117 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 TIGITQ495A1 244 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 C16orf54Q6UWD8 224 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
CHMP3-203ENST00000409225 TXNL4BQ9NX01 149 aaKnown RBP11.78□□□□□ -0.52
CHMP3-203ENST00000409225 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 HLA-DRB4P13762 266 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-203ENST00000409225 OXA1LQ15070 435 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 MLANAQ16655 118 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 MRGPRFQ96AM1 343 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-203ENST00000409225 U3KQE9 123 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 HLA-DRB4X5D2U9 266 aa11.77□□□□□ -0.53
CHMP3-203ENST00000409225 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 HNRNPCP07910 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHMP3-203ENST00000409225 OPRK1P41145 380 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 AQP4P55087 323 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 DEFB1P60022 68 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 DAD1P61803 113 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 OR4X1Q8NH49 305 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 DIABLOQ9NR28 239 aa11.76□□□□□ -0.53
CHMP3-203ENST00000409225 YTHDF2Q9Y5A9 579 aaKnown RBP11.76□□□□□ -0.53
CHMP3-203ENST00000409225 A0A0A6YYH2 397 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 LOC102723971A0A1B0GUV8 181 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 A6NJ64 397 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 EPM2AB3EWF7 344 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 CORTO00230 105 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 CLEC2LP0C7M8 214 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
CHMP3-203ENST00000409225 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 OR5H2Q8NGV7 314 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
CHMP3-203ENST00000409225 INAFM2P0DMQ5 153 aa11.74□□□□□ -0.53
CHMP3-203ENST00000409225 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHMP3-203ENST00000409225 MXD1Q05195 221 aa11.74□□□□□ -0.53
CHMP3-203ENST00000409225 IDNKQ5T6J7 187 aa11.74□□□□□ -0.53
CHMP3-203ENST00000409225 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
CHMP3-203ENST00000409225 SEPSECSQ9HD40 501 aaKnown RBP11.74□□□□□ -0.53
CHMP3-203ENST00000409225 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-203ENST00000409225 HBE1P02100 147 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 S100GP29377 79 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms