RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NDUFA13Q9P0J0 144 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 SHPKQ9UHJ6 478 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 HAGHQ16775 308 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 TM2D3Q9BRN9 247 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 HIPK2Q9H2X6 1198 aa13.14□□□□□ -0.31
UPK3A-202ENST00000396082 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
UPK3A-202ENST00000396082 CCR6P51684 374 aa13.13□□□□□ -0.31
UPK3A-202ENST00000396082 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
UPK3A-202ENST00000396082 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
UPK3A-202ENST00000396082 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
UPK3A-202ENST00000396082 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
UPK3A-202ENST00000396082 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 NMSQ5H8A3 153 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 CENPSQ8N2Z9 138 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
UPK3A-202ENST00000396082 SMPXQ9UHP9 88 aa13.12□□□□□ -0.31
UPK3A-202ENST00000396082 TRAV14DV4A0A0A6YYC5 116 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 LINC00854A0A1B0GVQ3 168 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 NAP1L6A6NFF2 107 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 TSPAN4O14817 238 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 BAK1Q16611 211 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 C2orf83Q53S99 150 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 NOXA1Q86UR1 476 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 RHPN1-AS1Q9BWJ2 59 aa13.11□□□□□ -0.31
UPK3A-202ENST00000396082 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
UPK3A-202ENST00000396082 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 CLN5O75503 358 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 TMEM50AO95807 157 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 IFNA10P01566 189 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 NPY1RP25929 384 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 BMI1P35226 326 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 MLANAQ16655 118 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
UPK3A-202ENST00000396082 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
UPK3A-202ENST00000396082 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 A0A1B0GU03 582 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
UPK3A-202ENST00000396082 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
UPK3A-202ENST00000396082 OR4C46A6NHA9 309 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 CENPXA8MT69 81 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 CHEK1O14757 476 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 SFT2D2O95562 160 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
UPK3A-202ENST00000396082 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 RNF2Q99496 336 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 RBKSQ9H477 322 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 MRPL36Q9P0J6 103 aaKnown RBP13.09□□□□□ -0.31
UPK3A-202ENST00000396082 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 UBQLN2Q9UHD9 624 aa13.09□□□□□ -0.31
UPK3A-202ENST00000396082 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
UPK3A-202ENST00000396082 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
UPK3A-202ENST00000396082 SLC25A4P12235 298 aa13.08□□□□□ -0.32
UPK3A-202ENST00000396082 RND2P52198 227 aa13.08□□□□□ -0.32
UPK3A-202ENST00000396082 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
UPK3A-202ENST00000396082 U3KQ87 197 aa13.08□□□□□ -0.32
UPK3A-202ENST00000396082 IGKV3-7A0A075B6H7 116 aa13.07□□□□□ -0.32
UPK3A-202ENST00000396082 TFPI2P48307 235 aa13.07□□□□□ -0.32
UPK3A-202ENST00000396082 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
UPK3A-202ENST00000396082 ZFAND3Q9H8U3 227 aa13.07□□□□□ -0.32
UPK3A-202ENST00000396082 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
UPK3A-202ENST00000396082 NDUFB6O95139 128 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 IFNA4P05014 189 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 HOXB5P09067 269 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 IL7P13232 177 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 UBE2MP61081 183 aaKnown RBP13.06□□□□□ -0.32
UPK3A-202ENST00000396082 TIGITQ495A1 244 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 TCF24Q7RTU0 167 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 OR1S2Q8NGQ3 325 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 METTL26Q96S19 204 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 SDHCQ99643 169 aaPredicted RBP13.06□□□□□ -0.32
UPK3A-202ENST00000396082 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
UPK3A-202ENST00000396082 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 RETNQ9HD89 108 aa13.06□□□□□ -0.32
UPK3A-202ENST00000396082 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
UPK3A-202ENST00000396082 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 CD5P06127 495 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 NPPCP23582 126 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 OR10J1P30954 320 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
UPK3A-202ENST00000396082 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 MUC7Q8TAX7 377 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms