RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FSHBP01225 129 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 IFNA1P01562 189 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-204ENST00000395454 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-204ENST00000395454 RAB31Q13636 194 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 SOHLH1Q5JUK2 328 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 MRPL41Q8IXM3 137 aaKnown RBP12.03□□□□□ -0.48
SCAF11-204ENST00000395454 SRSF8Q9BRL6 282 aaKnown RBP12.03□□□□□ -0.48
SCAF11-204ENST00000395454 GNG13Q9P2W3 67 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 VAX2Q9UIW0 290 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 HILPDAQ9Y5L2 63 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 NIPBLQ6KC79 2804 aaeCLIP12.02□□□□□ -0.482e-6■■■■■ 44.5
SCAF11-204ENST00000395454 PAX6P26367 422 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 CNTFRP26992 372 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 SSBP2P81877 361 aaPredicted RBP12.02□□□□□ -0.49
SCAF11-204ENST00000395454 GAMTQ14353 236 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 HNF4GQ14541 408 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 SSX2Q16385 188 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 SLC45A2Q9UMX9 530 aa12.02□□□□□ -0.49
SCAF11-204ENST00000395454 TBL2Q9Y4P3 447 aaKnown RBP12.02□□□□□ -0.49
SCAF11-204ENST00000395454 SOX21Q9Y651 276 aaPredicted RBP12.02□□□□□ -0.49
SCAF11-204ENST00000395454 IGKV1OR2-108A0A075B7D4 117 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 A0A0U1RQK1 487 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 NDUFA3O95167 84 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCAF11-204ENST00000395454 BPIFB3P59826 476 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 FAM122CQ6P4D5 195 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 RBMS3Q6XE24 437 aaKnown RBP12.01□□□□□ -0.49
SCAF11-204ENST00000395454 NPBQ8NG41 125 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 MANBALQ9NQG1 85 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 LINC00869P0C866 280 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
SCAF11-204ENST00000395454 EBI3Q14213 229 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 CCDC144NLQ6NUI1 221 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-204ENST00000395454 STPG3Q8N7X2 389 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 CYB561D1Q8N8Q1 229 aa12.01□□□□□ -0.49
SCAF11-204ENST00000395454 METTL1Q9UBP6 276 aaKnown RBP12.01□□□□□ -0.49
SCAF11-204ENST00000395454 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
SCAF11-204ENST00000395454 TEX22C9J3V5 150 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 CRYGCP07315 174 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 OR13C7P0DN81 318 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 PSMB3P49720 205 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 B2MP61769 119 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 RHEBQ15382 184 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 GCSAMLQ5JQS6 135 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 FAM90A2PQ658T7 463 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 MALSU1Q96EH3 234 aa12□□□□□ -0.49
SCAF11-204ENST00000395454 ZFP92A6NM28 416 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 SRD5A1P18405 259 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 Q8N6K4 173 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 ACTL6BO94805 426 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 MOSP00540 346 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 MEF2BQ02080 365 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-204ENST00000395454 AWAT1Q58HT5 328 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
SCAF11-204ENST00000395454 FNDC4Q9H6D8 234 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-204ENST00000395454 TMA7Q9Y2S6 64 aaKnown RBP11.99□□□□□ -0.49
SCAF11-204ENST00000395454 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 TMEM250H0YL14 139 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 NBR2O15453 112 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 FBP1P09467 338 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 DEFA4P12838 97 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 CD81P60033 236 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 TNXAQ16473 311 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.98□□□□□ -0.49
SCAF11-204ENST00000395454 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 C19orf24Q9BVV8 132 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 FBXL15Q9H469 300 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 TUBA4BQ9H853 241 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 C7orf77A4D0Y5 90 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 CBLN2Q8IUK8 224 aa11.98□□□□□ -0.49
SCAF11-204ENST00000395454 EAF1Q96JC9 268 aaPredicted RBP11.98□□□□□ -0.49
SCAF11-204ENST00000395454 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 H3BQ15 152 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 CORTO00230 105 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
SCAF11-204ENST00000395454 MFAP2P55001 183 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 RHOBP62745 196 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 TMEM88Q6PEY1 159 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 OR2T10Q8NGZ9 312 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
SCAF11-204ENST00000395454 TMPRSS5Q9H3S3 457 aa11.97□□□□□ -0.49
SCAF11-204ENST00000395454 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
SCAF11-204ENST00000395454 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms