RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TMEM17Q86X19 198 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 OR4A16Q8NH70 328 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 MTFP1Q9UDX5 166 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 FBXL17Q9UF56 701 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 TMEM56-RWDD3S4R434 201 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 TNFSF12O43508 249 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 CDS2O95674 445 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 LY6G6CO95867 125 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 SLC25A6P12236 298 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 RPS19P39019 145 aaKnown RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 PAX9P55771 341 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ST8SIA2Q92186 375 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 A0A087WXM4 84 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 A0A0B4J293 547 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 DBX1A6NMT0 343 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 GNG7O60262 68 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 CFDP00746 253 aaPredicted RBP4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 HNRNPCP07910 306 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 OR11H2Q8NH07 326 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 RBMY1A1P0DJD3 496 aaKnown RBP4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 RBMY1CP0DJD4 496 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 HRH1P35367 487 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 RBMY1FQ15415 496 aaKnown RBP4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 Q6ZR54 194 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 METTL26Q96S19 204 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 UBQLN2Q9UHD9 624 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 IGLC1P0CG04 106 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 P0DMU3 169 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 NPPCP23582 126 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 GPX4P36969 197 aaPredicted RBP4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 PSMB3P49720 205 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 MEF2DQ14814 521 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF79Q15937 498 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 MZT2AQ6P582 158 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
SMARCAD1-203ENST00000394961 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 A0A1B0GU03 582 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 SOCS3O14543 225 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 ST8SIA3O43173 380 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 GABARAPO95166 117 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 IGKV1-17P01599 117 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 PMP2P02689 132 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 HLA-DRB4P13762 266 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 FXYD4P59646 89 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 AP3S1Q92572 193 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 NARS2Q96I59 477 aaKnown RBP4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 HLA-DRB4X5D2U9 266 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 NBEAL2Q6ZNJ1 2754 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 TEX13DA0A0J9YY54 714 aaPredicted RBP4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 C3orf85A0A1B0GTC6 90 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 YIF1AO95070 293 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 PTHLHP12272 177 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 C4BPBP20851 252 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 TSPAN14Q8NG11 270 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 RRNAD1Q96FB5 475 aaKnown RBP4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 PUS1Q9Y606 427 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 KRASP01116 189 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 P2RY1P47900 373 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 TAS2R19P59542 299 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 B2MP61769 119 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 SUPT4H1P63272 117 aaKnown RBP4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 SLC35G3Q8N808 338 aa4.49□□□□□ -1.69
SMARCAD1-203ENST00000394961 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 CA1P00915 261 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 FCER2P06734 321 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF182P17025 639 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 STHQ8IWL8 128 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 SAMD12Q8N8I0 201 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 LRTM2Q8N967 370 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 TERB2Q8NHR7 220 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 MRGPRFQ96AM1 343 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 FNDC4Q9H6D8 234 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 VCX3AQ9NNX9 186 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 CRYM-AS1A6NIL9 109 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 RFX2P48378 723 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 RPP25LQ8N5L8 163 aaKnown RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 GPR82Q96P67 336 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 SAV1Q9H4B6 383 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 RNF167Q9H6Y7 350 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 HSPB7Q9UBY9 170 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 PFDN2Q9UHV9 154 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 TBC1D24Q9ULP9 559 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 RFNGQ9Y644 331 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 S4R3C0 116 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 ELOA3CA0A087WX78 387 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 SMIM31A0A1B0GVY4 71 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 FNDC10F2Z333 226 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 BUB3O43684 328 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 TSPOP30536 169 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 S100A7P31151 101 aa4.48□□□□□ -1.69
SMARCAD1-203ENST00000394961 MEOX2P50222 304 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms