RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
PHTF1-205ENST00000393357 MEGF9Q9H1U4 602 aa13.41□□□□□ -0.26
PHTF1-205ENST00000393357 SPTA1P02549 2419 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 MT-ND6P03923 174 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 HOXC12P31275 282 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 MORN2Q502X0 79 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 ZBTB34Q8NCN2 500 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 TRAV8-1A0A0A6YYK1 113 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 IGHV2-26A0A0B4J1V2 119 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 MPDU1O75352 247 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 MEOX1P50221 254 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 OCIAD2Q56VL3 154 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
PHTF1-205ENST00000393357 FAM173AQ9BQD7 235 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 TMEM70Q9BUB7 260 aa13.4□□□□□ -0.26
PHTF1-205ENST00000393357 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 LEPROTL1O95214 131 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 MOSP00540 346 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 LINC00869P0C866 280 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 ESDP10768 282 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
PHTF1-205ENST00000393357 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 SLC25A5P05141 298 aaKnown RBP13.39□□□□□ -0.27
PHTF1-205ENST00000393357 ZNF835Q9Y2P0 537 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.39□□□□□ -0.27
PHTF1-205ENST00000393357 CDKN1BP46527 198 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 SARAFQ96BY9 339 aa13.39□□□□□ -0.27
PHTF1-205ENST00000393357 SAA2-SAA4A0A096LPE2 208 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 IGLV2-8P01709 118 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 SAA2P0DJI9 122 aaPredicted RBP13.38□□□□□ -0.27
PHTF1-205ENST00000393357 PSG9Q00887 426 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 IGHV1-69-2A0A0G2JMI3 117 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 GAGE12BA1L429 117 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 IZUMO1RA6ND01 250 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 VWC2LB2RUY7 222 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 COX7A2P2O60397 106 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 AREGP15514 252 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 SMIM21Q3B7S5 101 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 MOGAT3Q86VF5 341 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 C11orf53Q8IXP5 236 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
PHTF1-205ENST00000393357 C9JCJ5 164 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
PHTF1-205ENST00000393357 GSX1Q9H4S2 264 aaPredicted RBP13.37□□□□□ -0.27
PHTF1-205ENST00000393357 ABCA4P78363 2273 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 HSPE1P61604 102 aaKnown RBP13.37□□□□□ -0.27
PHTF1-205ENST00000393357 SLC25A34Q6PIV7 304 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 IGHV1-2P23083 117 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 OR8A1Q8NGG7 326 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 NPIPB3Q92617 1050 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 SAP30LQ9HAJ7 183 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
PHTF1-205ENST00000393357 TMSB15BA0A087X1C1 80 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 TAX1BP3O14907 124 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 TBR1Q16650 682 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 RNFT1Q5M7Z0 435 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 RBMXL3Q8N7X1 1067 aaKnown RBP13.36□□□□□ -0.27
PHTF1-205ENST00000393357 OR1B1Q8NGR6 318 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 AP1S3Q96PC3 154 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 IGHV3-72A0A0B4J1Y9 119 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 PGPA6NDG6 321 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 K7EMI3 77 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 MMP23AO75900 390 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 EIF4EBP1Q13541 118 aaPredicted RBP13.36□□□□□ -0.27
PHTF1-205ENST00000393357 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
PHTF1-205ENST00000393357 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
PHTF1-205ENST00000393357 IGKV3D-15A0A087WSY6 115 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 SRRM4A7MD48 611 aaKnown RBP13.35□□□□□ -0.27
PHTF1-205ENST00000393357 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 CHEK1O14757 476 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 PRSS57Q6UWY2 283 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
PHTF1-205ENST00000393357 C2orf70A6NJV1 201 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 C8orf88P0DMB2 117 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 CT45A1Q5HYN5 189 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 CT45A3Q8NHU0 189 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
PHTF1-205ENST00000393357 SIT1Q9Y3P8 196 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 PRSS46E5RG02 174 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 TAS2R45P59539 299 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 ZNF766Q5HY98 468 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
PHTF1-205ENST00000393357 ZCCHC24Q8N2G6 241 aaKnown RBP13.35□□□□□ -0.27
PHTF1-205ENST00000393357 PAXXQ9BUH6 204 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 IFI27L2Q9H2X8 130 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 CEP192Q8TEP8 1941 aa13.35□□□□□ -0.27
PHTF1-205ENST00000393357 A0A1W2PRE2 83 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 SS18L1O75177 396 aaPredicted RBP13.34□□□□□ -0.27
PHTF1-205ENST00000393357 VWA1Q6PCB0 445 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 LINC00322Q6ZN03 302 aaPredicted RBP13.34□□□□□ -0.27
PHTF1-205ENST00000393357 TXNDC17Q9BRA2 123 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 RIF1Q5UIP0 2472 aaKnown RBP13.34□□□□□ -0.27
PHTF1-205ENST00000393357 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 E7EUB6 86 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms