RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ATG101Q9BSB4 218 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 SRRM2Q9UQ35 2752 aaKnown RBP12.23□□□□□ -0.45
HMGN1-203ENST00000380748 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
HMGN1-203ENST00000380748 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
HMGN1-203ENST00000380748 SCGNO76038 276 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 FXYD7P58549 80 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 HERV-K104P61576 105 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 PRCDQ00LT1 54 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 OXA1LQ15070 435 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 KCTD21Q4G0X4 260 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 TSC22D3Q99576 134 aa12.21□□□□□ -0.45
HMGN1-203ENST00000380748 MRPL36Q9P0J6 103 aaKnown RBP12.21□□□□□ -0.45
HMGN1-203ENST00000380748 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
HMGN1-203ENST00000380748 RGS10O43665 173 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 C22orf42Q6IC83 251 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 LGALS14Q8TCE9 139 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
HMGN1-203ENST00000380748 DUSP21Q9H596 190 aa12.2□□□□□ -0.46
HMGN1-203ENST00000380748 FAM90A26D6RGX4 464 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 HLA-DRB4P13762 266 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 OR5AP2Q8NGF4 316 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 GLMPQ8WWB7 406 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
HMGN1-203ENST00000380748 HLA-DRB4X5D2U9 266 aa12.19□□□□□ -0.46
HMGN1-203ENST00000380748 TRAV18A0A075B6X5 111 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 NOTOA8MTQ0 251 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 EIF2B2P49770 351 aaKnown RBP12.18□□□□□ -0.46
HMGN1-203ENST00000380748 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
HMGN1-203ENST00000380748 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
HMGN1-203ENST00000380748 OGFRL1Q5TC84 451 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-203ENST00000380748 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 TMEM230Q96A57 120 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 DAPK2Q9UIK4 370 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 TPRKBQ9Y3C4 175 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 U3KQE9 123 aa12.18□□□□□ -0.46
HMGN1-203ENST00000380748 TRDV1A0A1B0GX56 115 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 DEFB1P60022 68 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
HMGN1-203ENST00000380748 DAD1P61803 113 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 SEC22AQ96IW7 307 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 NDUFB11Q9NX14 153 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
HMGN1-203ENST00000380748 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 MEIS3P1A6NDR6 274 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 CLN5O75503 358 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 MLANAQ16655 118 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 TIGITQ495A1 244 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
HMGN1-203ENST00000380748 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-203ENST00000380748 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-203ENST00000380748 IGKV1-39P01597 117 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 IGKV1D-39P04432 117 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 PRSS48Q7RTY5 328 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 CMTM1Q8IZ96 169 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 SLC25A38Q96DW6 304 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
HMGN1-203ENST00000380748 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 NUDT3O95989 172 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 SNCAP37840 140 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 RFX2P48378 723 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-203ENST00000380748 PHLDA2Q53GA4 152 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 DHRS11Q6UWP2 260 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 KRTAP1-5Q9BYS1 174 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
HMGN1-203ENST00000380748 LINC00588Q9Y4M8 146 aa12.14□□□□□ -0.47
HMGN1-203ENST00000380748 GPR31O00270 319 aa12.13□□□□□ -0.47
HMGN1-203ENST00000380748 HBE1P02100 147 aa12.13□□□□□ -0.47
HMGN1-203ENST00000380748 HNRNPCP07910 306 aaKnown RBP eCLIP12.13□□□□□ -0.475e-6■■■□□ 18.1
HMGN1-203ENST00000380748 RNASE2P10153 161 aaKnown RBP12.13□□□□□ -0.47
HMGN1-203ENST00000380748 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-203ENST00000380748 Q5VSD8 79 aa12.13□□□□□ -0.47
HMGN1-203ENST00000380748 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
HMGN1-203ENST00000380748 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
HMGN1-203ENST00000380748 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
HMGN1-203ENST00000380748 OPRK1P41145 380 aa12.12□□□□□ -0.47
HMGN1-203ENST00000380748 TBCEQ15813 527 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-203ENST00000380748 SFXN4Q6P4A7 337 aa12.12□□□□□ -0.47
HMGN1-203ENST00000380748 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
HMGN1-203ENST00000380748 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
HMGN1-203ENST00000380748 CORTO00230 105 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 SCGB2A1O75556 95 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 PMP2P02689 132 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms