RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SRP19P09132 144 aaKnown RBP13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 FBP1P09467 338 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 KHDC3LQ587J8 217 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 SVBPQ8N300 66 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 WNT10AQ9GZT5 417 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 APCP25054 2843 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 A0A1W2PPV4 95 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 HSPB1P04792 205 aaKnown RBP13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 RND2P52198 227 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 ASPHD1Q5U4P2 390 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 THAP8Q8NA92 274 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 MAPK1IP1LQ8NDC0 245 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 SEPSECSQ9HD40 501 aaKnown RBP13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 SOX21Q9Y651 276 aaPredicted RBP13.74□□□□□ -0.21
THUMPD2-201ENST00000378727 NAV2Q8IVL1 2488 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 CORTO00230 105 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 ETFRF1Q6IPR1 90 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 LINC01356Q8N9X3 169 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 IGHV3-21A0A0B4J1V1 117 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 MT-CO2P00403 227 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 PIFOQ8TCI5 191 aa13.73□□□□□ -0.21
THUMPD2-201ENST00000378727 RNF223E7ERA6 249 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 EGR2P11161 476 aaPredicted RBP13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 GATA3P23771 443 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 LOXL1Q08397 574 aaPredicted RBP13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 Q5PR19 223 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 MEGF9Q9H1U4 602 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 CR1P17927 2039 aa13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 HELZ2Q9BYK8 2649 aaKnown RBP13.72□□□□□ -0.21
THUMPD2-201ENST00000378727 I3L2K1 104 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 HLA-DRB1P01911 266 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 STAG3L2P0CL84 134 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 STAG3L3P0CL85 134 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 ZNF90Q03938 601 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 TMEM116Q8NCL8 245 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 HSPB9Q9BQS6 159 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 NKX6-2Q9C056 277 aaPredicted RBP13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 TCRBV4S1A1TA0A5B7 111 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 NPBWR1P48145 328 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 RHOBP62745 196 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 BTN1A1Q13410 526 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 SLC35E3Q7Z769 313 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 CYB561D1Q8N8Q1 229 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 VAX2Q9UIW0 290 aa13.71□□□□□ -0.21
THUMPD2-201ENST00000378727 NBPF19A0A087WUL8 3843 aa13.71□□□□□ -0.22
THUMPD2-201ENST00000378727 PSMB11A5LHX3 300 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 IFNA1P01562 189 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 ARL14EPLP0DKL9 152 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 IQCF2Q8IXL9 164 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 ZFHX3Q15911 3703 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 SNAPINO95295 136 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 SOHLH1Q5JUK2 328 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 RASL11BQ9BPW5 248 aa13.7□□□□□ -0.22
THUMPD2-201ENST00000378727 K7EIM0 57 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 MIR17HGQ75NE6 70 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 TMEM219Q86XT9 240 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 TNFRSF19Q9NS68 423 aa13.69□□□□□ -0.22
THUMPD2-201ENST00000378727 PSMB3P49720 205 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 CEBPGP53567 150 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 CD81P60033 236 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 CLRN3Q8NCR9 226 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 FANCD2OSQ96PS1 177 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 TRGV9Q99603 122 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 GSX1Q9H4S2 264 aaPredicted RBP13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 MANBALQ9NQG1 85 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 SH2D7A6NKC9 451 aaPredicted RBP13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 PAGE4O60829 102 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 CXorf1O96002 111 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 TGFAP01135 160 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 OR5G3P0C626 314 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 MEF2BQ02080 365 aaPredicted RBP13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 OR1L6Q8NGR2 347 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 C22orf15Q8WYQ4 148 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 RBM14Q96PK6 669 aaKnown RBP13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 SSX3Q99909 188 aa13.68□□□□□ -0.22
THUMPD2-201ENST00000378727 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
THUMPD2-201ENST00000378727 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
THUMPD2-201ENST00000378727 SELENOTP62341 195 aa13.67□□□□□ -0.22
THUMPD2-201ENST00000378727 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms