RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 H7C1H1 209 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 NPFFO15130 113 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 APOHP02749 345 aaPredicted RBP12.61□□□□□ -0.39
EXT1-201ENST00000378204 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
EXT1-201ENST00000378204 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
EXT1-201ENST00000378204 CACNG7P62955 275 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 PLAURQ03405 335 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 ACP7Q6ZNF0 438 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 CD5LO43866 347 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 CEACAM4O75871 244 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 SP9P0CG40 484 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 ICAM4Q14773 271 aa12.61□□□□□ -0.39
EXT1-201ENST00000378204 CTSBP07858 339 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 IMMP2LQ96T52 175 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 TMEM242Q9NWH2 141 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 ADAMTSL5Q6ZMM2 481 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.6□□□□□ -0.39
EXT1-201ENST00000378204 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 NPCDR1Q9BY65 106 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE12JA6NER3 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE7O76087 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE12FP0CL80 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE12GP0CL81 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE12IP0CL82 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 CEACAM1P13688 526 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 GAGE4Q13068 117 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 DPH3Q96FX2 82 aa12.6□□□□□ -0.39
EXT1-201ENST00000378204 COLCA2A8K830 154 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 HIST1H4AP62805 103 aaKnown RBP12.59□□□□□ -0.39
EXT1-201ENST00000378204 C1orf162Q8NEQ5 155 aaPredicted RBP12.59□□□□□ -0.39
EXT1-201ENST00000378204 MLNRO43193 412 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 MOSP00540 346 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 TMEM258P61165 79 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 H3BTX0 84 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 TRGV3P03979 118 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 TIAF1O95411 115 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 TMEM238C9JI98 176 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 FER1L6-AS1Q8NA97 138 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 DPM3Q9P2X0 92 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
EXT1-201ENST00000378204 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 PF4P02776 101 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 TMEM144Q7Z5S9 345 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 IGKV3OR2-268A0A0C4DH90 116 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 RAMP1O60894 148 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 CT83Q5H943 113 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 WDR82Q6UXN9 313 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 PPP1R32Q7Z5V6 425 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 SSBP3Q9BWW4 388 aaPredicted RBP12.58□□□□□ -0.4
EXT1-201ENST00000378204 NEUROG3Q9Y4Z2 214 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 CHCHD2Q9Y6H1 151 aaPredicted RBP12.58□□□□□ -0.4
EXT1-201ENST00000378204 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
EXT1-201ENST00000378204 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
EXT1-201ENST00000378204 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
EXT1-201ENST00000378204 LHX2P50458 406 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 TBR1Q16650 682 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 TNCP24821 2201 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 UCP1P25874 307 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 ADMP35318 185 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
EXT1-201ENST00000378204 CACNG8Q8WXS5 425 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 CD300EQ496F6 205 aaPredicted RBP12.57□□□□□ -0.4
EXT1-201ENST00000378204 GNB1LQ9BYB4 327 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 SLC25A15Q9Y619 301 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 ZNF703Q9H7S9 590 aaPredicted RBP12.57□□□□□ -0.4
EXT1-201ENST00000378204 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 DPM2O94777 84 aa12.57□□□□□ -0.4
EXT1-201ENST00000378204 IL6RP08887 468 aaPredicted RBP12.57□□□□□ -0.4
EXT1-201ENST00000378204 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
EXT1-201ENST00000378204 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 ATP1A1-AS1Q5TC04 95 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 ERG28Q9UKR5 140 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 CECR9P0C854 216 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 ZNF664Q8N3J9 261 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 TRBV24-1A0A075B6N3 115 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
EXT1-201ENST00000378204 NEU4Q8WWR8 484 aaPredicted RBP12.56□□□□□ -0.4
EXT1-201ENST00000378204 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms