RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 IGLV3-9A0A075B6K5 115 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 C8orf88P0DMB2 117 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 Q6ZS92 163 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 SLC25A48Q6ZT89 311 aaKnown RBP10.51□□□□□ -0.73
USP11-204ENST00000377107 C1orf174Q8IYL3 243 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 S4R3C0 116 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 FAM90A27PA6NNH2 459 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 GCGP01275 180 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 TPPP2P59282 170 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 C10orf113Q5VZT2 155 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 RITA1Q96K30 269 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
USP11-204ENST00000377107 CCKARP32238 428 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 CFHR2P36980 270 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 RPL15P61313 204 aaKnown RBP10.51□□□□□ -0.73
USP11-204ENST00000377107 TDRG1Q3Y452 100 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 ATOH7Q8N100 152 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 FAM57AQ8TBR7 257 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
USP11-204ENST00000377107 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 ZNF835Q9Y2P0 537 aa10.51□□□□□ -0.73
USP11-204ENST00000377107 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 LY6HO94772 140 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
USP11-204ENST00000377107 CGB3P0DN86 165 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 CGB7P0DN87 165 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 CD24P25063 80 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 FOXL1Q12952 345 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 ZNF331Q9NQX6 463 aaPredicted RBP10.5□□□□□ -0.73
USP11-204ENST00000377107 SRIP30626 198 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 UBE2G1P62253 170 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 CD69Q07108 199 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 OR5R1Q8NH85 324 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 LINC01560Q8TB33 94 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 LRBAP50851 2863 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 CNTFRP26992 372 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 CDKN1AP38936 164 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
USP11-204ENST00000377107 MFAP2P55001 183 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 RPL19P84098 196 aaKnown RBP10.5□□□□□ -0.73
USP11-204ENST00000377107 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 TMEM68Q96MH6 324 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 ASCL2Q99929 193 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
USP11-204ENST00000377107 AMMECR1Q9Y4X0 333 aaPredicted RBP10.5□□□□□ -0.73
USP11-204ENST00000377107 EREGO14944 169 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 PRR20EP86478 221 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 PRR20CP86479 221 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 PRR20DP86480 221 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 PRR20BP86481 221 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 PRR20AP86496 221 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 DMRTC2Q8IXT2 367 aaPredicted RBP10.49□□□□□ -0.73
USP11-204ENST00000377107 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
USP11-204ENST00000377107 A8MWP6 167 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 H0YJW9 148 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 CNIH1O95406 144 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 WT1-ASQ06250 92 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.49□□□□□ -0.73
USP11-204ENST00000377107 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 FAM168AQ92567 244 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 DLL1O00548 723 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 USF1P22415 310 aaPredicted RBP10.49□□□□□ -0.73
USP11-204ENST00000377107 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.73
USP11-204ENST00000377107 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
USP11-204ENST00000377107 FNDC4Q9H6D8 234 aaPredicted RBP10.49□□□□□ -0.73
USP11-204ENST00000377107 H0Y8G0 127 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 TYMSP04818 313 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 FAM87AP0C7U9 286 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 CD99P14209 185 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 TPPP3Q9BW30 176 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
USP11-204ENST00000377107 RBP4P02753 201 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 TMPRSS3P57727 454 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 LYZP61626 148 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 SLC25A33Q9BSK2 321 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 GNB4Q9HAV0 340 aa10.48□□□□□ -0.73
USP11-204ENST00000377107 MAP1AP78559 2803 aaPredicted RBP10.48□□□□□ -0.73
USP11-204ENST00000377107 PGPA6NDG6 321 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 OR2D3Q8NGH3 330 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 AREGP15514 252 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 ZNF137PP52743 207 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 HES1Q14469 280 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 CYB5R2Q6BCY4 276 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
USP11-204ENST00000377107 POLR3KQ9Y2Y1 108 aaPredicted RBP10.47□□□□□ -0.73
USP11-204ENST00000377107 GATA4P43694 442 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 C22orf15Q8WYQ4 148 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 VAMP8Q9BV40 100 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 WNT10AQ9GZT5 417 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 ONECUT1Q9UBC0 465 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms