RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 F8WEM9 126 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 ZG16O60844 167 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 SAMD5Q5TGI4 173 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 IFI27L2Q9H2X8 130 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 FAM60AQ9NP50 221 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 LHFPL6Q9Y693 200 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 GP6Q9HCN6 339 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 RPRMQ9NS64 109 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
HSPG2-203ENST00000374695 VGLL1Q99990 258 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 Q9H3A6 140 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 TMEM8BA6NDV4 472 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 F2Z2F3 143 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 DRD3P35462 400 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 NDUFS6O75380 124 aaKnown RBP7.11□□□□□ -1.27
HSPG2-203ENST00000374695 PDLIM4P50479 330 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 LINC01587Q99440 93 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 MRPL20Q9BYC9 149 aaKnown RBP7.11□□□□□ -1.27
HSPG2-203ENST00000374695 MPZP25189 248 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 H2BFSP57053 126 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 LOXL4Q96JB6 756 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 PTPRBP23467 1997 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 TRGV11A0A075B6L2 103 aa7.11□□□□□ -1.27
HSPG2-203ENST00000374695 COLCA2A8K830 154 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 ABHD12Q8N2K0 398 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 DRAM1Q8N682 238 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 DLL3Q9NYJ7 618 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 MOSP00540 346 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 VKORC1Q9BQB6 163 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 HS3ST3B1Q9Y662 390 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 IGHV1-45A0A0A0MS14 117 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 CENPVQ7Z7K6 275 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 C20orf144Q9BQM9 153 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 FNDC4Q9H6D8 234 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 LAGE3Q14657 143 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 HIST3H2BBQ8N257 126 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 HRKO00198 91 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 IGKCP01834 107 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 Q6ZS52 159 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 OR52E5Q8NH55 327 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 OR9G9P0C7N8 305 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 CD5P06127 495 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 LHFPL4Q7Z7J7 247 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 ZNF703Q9H7S9 590 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 ZNF708P17019 499 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 SSBP2P81877 361 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 NRN1LQ496H8 165 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 CACNA1AO00555 2505 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 PRSS12P56730 875 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 KCNK17Q96T54 332 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 SSBP3Q9BWW4 388 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-203ENST00000374695 FAM90A9PA6NNJ1 464 aa7.1□□□□□ -1.27
HSPG2-203ENST00000374695 ZNF479Q96JC4 524 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 NTN1O95631 604 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 GZMMP51124 257 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 NPIPB3Q92617 1050 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ST6GALNAC6Q969X2 333 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 CELA2BP08218 269 aaPredicted RBP7.09□□□□□ -1.27
HSPG2-203ENST00000374695 FABP5P3A8MUU1 101 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ATP5J2P56134 94 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 FOXL1Q12952 345 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ZPLD1Q8TCW7 415 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 C21orf62Q9NYP8 219 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 A0A0G2JMM0 328 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 A0A1W2PPB8 328 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 KIR3DP1A8MWS1 328 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ZNF385AQ96PM9 386 aaKnown RBP7.09□□□□□ -1.27
HSPG2-203ENST00000374695 TM2D1Q9BX74 207 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
HSPG2-203ENST00000374695 RIPPLY3P57055 190 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 RHOGP84095 191 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 Q5BKY6 102 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ZIC4Q8N9L1 334 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 SSC4DQ8WTU2 575 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ZNF106Q9H2Y7 1883 aaKnown RBP7.09□□□□□ -1.27
HSPG2-203ENST00000374695 TRAV8-1A0A0A6YYK1 113 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 RNF222A6NCQ9 220 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
HSPG2-203ENST00000374695 WBP1LQ9NX94 342 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 TOMM40O96008 361 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 C1QAP02745 245 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 LINC01565O15544 149 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 IGHV2-70P01814 119 aa7.09□□□□□ -1.27
HSPG2-203ENST00000374695 ANKHD1Q8IWZ3 2542 aaKnown RBP7.09□□□□□ -1.28
HSPG2-203ENST00000374695 IGHV3-72A0A0B4J1Y9 119 aa7.09□□□□□ -1.28
HSPG2-203ENST00000374695 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.28
HSPG2-203ENST00000374695 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.28
HSPG2-203ENST00000374695 TMEM167AQ8TBQ9 72 aa7.09□□□□□ -1.28
HSPG2-203ENST00000374695 KLF14Q8TD94 323 aaPredicted RBP7.09□□□□□ -1.28
HSPG2-203ENST00000374695 PLEKHB2Q96CS7 222 aa7.09□□□□□ -1.28
HSPG2-203ENST00000374695 PILRBQ9UKJ0 227 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms