RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ZCCHC24Q8N2G6 241 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 Q9H3A6 140 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 CBLN4Q9NTU7 201 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 NOTCH4Q99466 2003 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 STAG3L3P0CL85 134 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 MBD3L4A6NDZ8 208 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 MBD3L3A6NE82 208 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 MBD3L5A6NJ08 208 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 ERASQ7Z444 233 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 FAM169BQ8N8A8 192 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 MBD3L2Q8NHZ7 208 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 GGTLC1Q9BX51 225 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 CADP27708 2225 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 C1QTNF9P0C862 333 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 PSMG4Q5JS54 123 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 TMEM190Q8WZ59 177 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 CCL19Q99731 98 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 SOD3P08294 240 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 HERPUD1Q15011 391 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 RPP25LQ8N5L8 163 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 TBL2Q9Y4P3 447 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 COL4A6Q14031 1691 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 AUP1Q9Y679 476 aa9.82□□□□□ -0.84
DEPDC1-201ENST00000370966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.844e-8■■■■■ 30.4
DEPDC1-201ENST00000370966 TRBV20OR9-2A0A075B6H5 130 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 COLCA2A8K830 154 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BKO60814 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BJP06899 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 AREGP15514 252 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BOP23527 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 GPR183P32249 361 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BBP33778 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BDP58876 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BCP62807 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HGFACQ04756 655 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST2H2BEQ16778 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BHQ93079 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BNQ99877 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 EPDR1Q9UM22 224 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 PPP1R17O96001 155 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 TEX38Q6PEX7 206 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 IGHV3OR16-13A0A075B7E8 117 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 IGHV3-74A0A0B4J1X5 117 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIGD1CA8MV81 97 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 SPACA3Q8IXA5 215 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 CD177Q8N6Q3 437 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 KIR2DL4Q99706 377 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 USF3Q68DE3 2245 aa9.81□□□□□ -0.84
DEPDC1-201ENST00000370966 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 RNF125Q96EQ8 232 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 C1orf147Q96MC9 270 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 PRELID3AQ96N28 172 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 GAGE10A6NGK3 116 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 FAM168AQ92567 244 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 RAX2Q96IS3 184 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 SHANK1Q9Y566 2161 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 UBE2CO00762 179 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 IGKV3-15P01624 115 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 SELLP14151 372 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 Q6ZS92 163 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 ANAPC10Q9UM13 185 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 S4R3C0 116 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 LILRA1O75019 489 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 GCSAMLQ5JQS6 135 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 COQ2Q96H96 371 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 KCNS1Q96KK3 526 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 PLXNA2O75051 1894 aa9.8□□□□□ -0.84
DEPDC1-201ENST00000370966 FABP2P12104 132 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 ZNF414Q96IQ9 312 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 PRDM13Q9H4Q3 707 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 MBNL3Q9NUK0 354 aaKnown RBP9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 RNF5Q99942 180 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 SLC50A1Q9BRV3 221 aa9.79□□□□□ -0.84
DEPDC1-201ENST00000370966 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 TMEM167AQ8TBQ9 72 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 TMEM178BH3BS89 294 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 MLNRO43193 412 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 SERF1AO75920 110 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 THBDP07204 575 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 GCSHP23434 173 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 CENPVQ7Z7K6 275 aaPredicted RBP9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
DEPDC1-201ENST00000370966 ATP5LO75964 103 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms