RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 IFITM3Q01628 133 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 TMEM190Q8WZ59 177 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 F5P12259 2224 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 LY75O60449 1722 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 TGFBR3LH3BV60 316 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 EFNB1P98172 346 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 COQ2Q96H96 371 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 C14orf144Q96I85 54 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 SLC25A16P16260 332 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 ST6GALNAC6Q969X2 333 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 CCL20P78556 96 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
NUCKS1-201ENST00000367142 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 CD59P13987 128 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 C18orf12Q96KH6 178 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 NHLRC3Q5JS37 347 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 SPSB3Q6PJ21 355 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
NUCKS1-201ENST00000367142 TPTE2P1Q5T6R2 138 aa13.02□□□□□ -0.32
NUCKS1-201ENST00000367142 TOMM40O96008 361 aa13.02□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC01356Q8N9X3 169 aa13.02□□□□□ -0.32
NUCKS1-201ENST00000367142 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.32
NUCKS1-201ENST00000367142 PPIFP30405 207 aaKnown RBP13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 PYYP10082 97 aa13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 CEACAM8P31997 349 aaPredicted RBP13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 C15orf32Q32M92 178 aa13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 RNASE7Q9H1E1 156 aaKnown RBP13.02□□□□□ -0.33
NUCKS1-201ENST00000367142 IGLV3-32A0A0A0MS00 114 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A1W2PRE2 83 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 INSP01308 110 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 TEX38Q6PEX7 206 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 TRBV7-1A0A0A6YYK4 115 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 TMEM8BA6NDV4 472 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 EVI2AP22794 236 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 SRSF6Q13247 344 aaKnown RBP13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 LINC00114Q6XXX2 140 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 C5orf30Q96GV9 206 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 H3BUX3 64 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 IGKCP01834 107 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A1B0GTI1 187 aa13.01□□□□□ -0.33
NUCKS1-201ENST00000367142 M0R2P5 195 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 TFF1P04155 84 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 ATXN8Q156A1 80 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 GTF3AQ92664 365 aaKnown RBP13□□□□□ -0.33
NUCKS1-201ENST00000367142 RNF5Q99942 180 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 MS4A6AQ9H2W1 248 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 FAM19A2Q8N3H0 131 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 ST6GALNAC3Q8NDV1 305 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 PLSCR4Q9NRQ2 329 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A1B0GV72 72 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 PINLYPA6NC86 204 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 RASL10AQ92737 203 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A0U1RRA0 63 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 M0R1W7 72 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 RAMP3O60896 148 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 IGHV1-8P0DP01 117 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 DUTP33316 252 aaKnown RBP13□□□□□ -0.33
NUCKS1-201ENST00000367142 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A087WWC5 75 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 IGHV3-73A0A0B4J1V6 119 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 GATD1Q8NB37 220 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 ZNFX1Q9P2E3 1918 aaKnown RBP12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 NTN3O00634 580 aaPredicted RBP12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 IGFBP3P17936 291 aaPredicted RBP12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 KLRD1Q13241 179 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 LCNL1Q6ZST4 164 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 PRDM13Q9H4Q3 707 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 OSTCQ9NRP0 149 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 VWCEQ96DN2 955 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 A0A1B0GV90 55 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 MLNRO43193 412 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 PAX4O43316 350 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 FOXF2Q12947 444 aa12.99□□□□□ -0.33
NUCKS1-201ENST00000367142 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
NUCKS1-201ENST00000367142 FAM223BA6NKX1 122 aa12.98□□□□□ -0.33
NUCKS1-201ENST00000367142 LAGE3Q14657 143 aa12.98□□□□□ -0.33
NUCKS1-201ENST00000367142 FAM223AQ8IWN6 122 aa12.98□□□□□ -0.33
NUCKS1-201ENST00000367142 SCN4AP35499 1836 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms