RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 HACD4Q5VWC8 232 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 C22orf42Q6IC83 251 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CNIH2Q6PI25 160 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 PLET1Q6UQ28 207 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 PRSS48Q7RTY5 328 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 SLC38A6Q8IZM9 456 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CXorf58Q96LI9 332 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CMTM3Q96MX0 182 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 HSD17B10Q99714 261 aaKnown RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CENPOQ9BU64 300 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CCL28Q9NRJ3 127 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 MRPL27Q9P0M9 148 aaKnown RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 FRAS1Q86XX4 4008 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGHV3-21A0A0B4J1V1 117 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRAV3A0A0B4J244 114 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRAV25A0A0B4J276 109 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 A0A1B0GU03 582 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRDV1A0A1B0GX56 115 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 ERICH4A6NGS2 130 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR2T8A6NH00 312 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 SULT1C2O00338 296 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF207O43670 478 aaKnown RBP3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 SLC22A5O76082 557 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 FCGR2CP31995 323 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 FXYD4P59646 89 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR2B8PP59922 312 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 ARL6IP1Q15041 203 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 KIAA1644Q3SXP7 199 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 NOTCH2NLQ7Z3S9 236 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 SPAG16Q8N0X2 631 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 GVQW1Q8N7I0 195 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR10W1Q8NGF6 305 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR13F1Q8NGS4 319 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR5B3Q8NH48 314 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF502Q8TBZ5 544 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 LGALS14Q8TCE9 139 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 PHLDA1Q8WV24 401 aaPredicted RBP3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 MARC2Q969Z3 335 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 C20orf24Q9BUV8 137 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 DCSTAMPQ9H295 470 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 C5orf66Q9H5L9 145 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 NDUFB11Q9NX14 153 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 BET1LQ9NYM9 111 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 DAPK2Q9UIK4 370 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 TP53TG1Q9Y2A0 90 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 KLK5Q9Y337 293 aaPredicted RBP3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 UFC1Q9Y3C8 167 aa3.79□□□□□ -1.8
RNU4-4P-201ENST00000364588 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGKV3-7A0A075B6H7 116 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGHV3-49A0A0A0MS15 119 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 UPK2O00526 184 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 UBE2CO00762 179 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 TGOLN2O43493 480 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 PPYP01298 95 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 CTSDP07339 412 aaPredicted RBP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR13C7P0DN81 318 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 GALP22466 123 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 PTBP1P26599 531 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 TFPI2P48307 235 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 ARPC4P59998 168 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 SNRPEP62304 92 aaKnown RBP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 KLK9Q2XQG4 91 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZFP69Q49AA0 526 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 LAMTOR1Q6IAA8 161 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 SLC25A24Q6NUK1 477 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF773Q6PK81 442 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 TMEM17Q86X19 198 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 APRG1Q8IVJ8 170 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 UBAC2Q8NBM4 344 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 BEST4Q8NFU0 473 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR51H1Q8NH63 302 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR4A5Q8NH83 315 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 CNBD2Q96M20 576 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 CHRDL1Q9BU40 450 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 HINT2Q9BX68 163 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF436Q9C0F3 470 aaPredicted RBP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 COMMD5Q9GZQ3 224 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 DAZ1Q9NQZ3 744 aaKnown RBP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 THYN1Q9P016 225 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 KLK9Q9UKQ9 250 aa3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 RRP15Q9Y3B9 282 aaKnown RBP3.78□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRAV18A0A075B6X5 111 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 KIR2DL5BA0A0G2JN68 375 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 KIR2DL5BA0A0G2JPC4 375 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 TEX13DA0A0J9YY54 714 aaPredicted RBP3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 MEIS3P1A6NDR6 274 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 OR4C46A6NHA9 309 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 DEFB4AO15263 64 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 CYB5BO43169 146 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 RBFOX2O43251 390 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 HPRT1P00492 218 aa3.77□□□□□ -1.81
RNU4-4P-201ENST00000364588 SERPINE2P07093 398 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms