RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 C16orf82Q7Z2V1 217 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 BCL6BQ8N143 479 aaPredicted RBP16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 TTC9CQ8N5M4 171 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 MISP3Q96FF7 219 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 HSPB9Q9BQS6 159 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 WNT10AQ9GZT5 417 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 KCNIP2Q9NS61 270 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ZNF469Q96JG9 3925 aaPredicted RBP16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 APOC3P02656 99 aa16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ASPHD1Q5U4P2 390 aa16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 C19orf35Q6ZS72 473 aa16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 TMUB1Q9BVT8 246 aa16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 GGTLC1Q9BX51 225 aa16.57■□□□□ 0.24
MAP1LC3A-201ENST00000360668 F8W036 122 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 M0QZK8 103 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ELLP55199 621 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 FFAR4Q5NUL3 377 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ACSM6Q6P461 480 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 OR2T6Q8NHC8 308 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SGMS2Q8NHU3 365 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 DMRT1Q9Y5R6 373 aa16.56■□□□□ 0.24
MAP1LC3A-201ENST00000360668 MDFIC2A0A1B0GVS7 189 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 RBFOX3A6NFN3 312 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 DEFA4P12838 97 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 LY6EQ16553 131 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SVBPQ8N300 66 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 EIF5A2Q9GZV4 153 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 VSIRQ9H7M9 311 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 CYB5BO43169 146 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 AMY1AP04745 511 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 M6PRP20645 277 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 CCL20P78556 96 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ACOT6Q3I5F7 207 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 TMEM68Q96MH6 324 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ACTR3CQ9C0K3 210 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 TMEM231Q9H6L2 316 aa16.55■□□□□ 0.24
MAP1LC3A-201ENST00000360668 CD99P14209 185 aa16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 RPL29P47914 159 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 RPP25LQ8N5L8 163 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ACY3Q96HD9 319 aa16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 RCC1LQ96I51 464 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SLC39A9Q9NUM3 307 aa16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 PXMP4Q9Y6I8 212 aa16.54■□□□□ 0.24
MAP1LC3A-201ENST00000360668 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ATP6V0E1O15342 81 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 MT-CO2P00403 227 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SFTA3P0C7M3 94 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 IER3P46695 156 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ZNF726P1Q15940 193 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 THAP8Q8NA92 274 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 OR10G4Q8NGN3 311 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 OR10G9Q8NGN4 311 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 OR10G7Q8NGN6 311 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 OR5R1Q8NH85 324 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 C22orf15Q8WYQ4 148 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SLC45A2Q9UMX9 530 aa16.53■□□□□ 0.24
MAP1LC3A-201ENST00000360668 CTXND1A0A1B0GTU2 59 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 C9JQL5 133 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 I3L2K1 104 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 CD5LO43866 347 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ADCYAP1P18509 176 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 DEFA5Q01523 94 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 KHDC3LQ587J8 217 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ZNF506Q5JVG8 444 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 MIC13Q5XKP0 118 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 TMEM116Q8NCL8 245 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 NPIPB3Q92617 1050 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 SLC35B3Q9H1N7 401 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 PRDM13Q9H4Q3 707 aa16.52■□□□□ 0.24
MAP1LC3A-201ENST00000360668 NDUFS6O75380 124 aaKnown RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 RND2P52198 227 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 B2MP61769 119 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PRR20EP86478 221 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PRR20CP86479 221 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PRR20DP86480 221 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PRR20BP86481 221 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PRR20AP86496 221 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 Q6YL49 198 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 FAM110DQ8TAY7 271 aaPredicted RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 MRPL36Q9P0J6 103 aaKnown RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGLV11-55A0A075B6I3 123 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SEC14L6B5MCN3 397 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 YIF1AO95070 293 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGHV4-59P01825 116 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 OR10J1P30954 320 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 TAGLN2P37802 199 aaKnown RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 CRIP2P52943 208 aaPredicted RBP16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 KRTAP1-1Q07627 177 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 AKIRIN2Q53H80 203 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 UNQ5815/PRO19632Q6UWF5 114 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 STPG3Q8N7X2 389 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 FANCD2OSQ96PS1 177 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 MTORP42345 2549 aa16.51■□□□□ 0.23
MAP1LC3A-201ENST00000360668 FLNAP21333 2647 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 MAP1LC3B2A6NCE7 125 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SNAPINO95295 136 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGHV3-48P01763 117 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 HSPB1P04792 205 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 KLK9Q2XQG4 91 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms