RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TMEM222Q9H0R3 208 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 NXF5Q9H1B4 397 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 NIT2Q9NQR4 276 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 DOCK7Q96N67 2140 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 LOC102725191A0A1B0GVB3 256 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 A8MT66 165 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 C1orf196B1AJZ1 125 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 BUB3O43684 328 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 YIF1AO95070 293 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CRYGAP11844 174 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF14P17017 642 aaPredicted RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPL13AP40429 203 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ELK3P41970 407 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPS10P46783 165 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SNRPD2P62316 118 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PPP3R1P63098 170 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CCL20P78556 96 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 EIF2B1Q14232 305 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CFAP126Q5VTH2 177 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 DPPA2Q7Z7J5 298 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR6T1Q8NGN1 323 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SECTM1Q8WVN6 248 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RTN4IP1Q8WWV3 396 aaPredicted RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 TBL1YQ9BQ87 522 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ISG20L2Q9H9L3 353 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 TAS2R8Q9NYW2 309 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 BOKQ9UMX3 212 aaPredicted RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 FNDC10F2Z333 226 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 DIRAS1O95057 198 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 MBP02144 154 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPLP0P05388 317 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CCL5P13501 91 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ERCC8Q13216 396 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 AMMECR1LQ6DCA0 310 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPL22L1Q6P5R6 122 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SVBPQ8N300 66 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 FGGYQ96C11 551 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SDSLQ96GA7 329 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 C9orf85Q96MD7 179 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR8B4Q96RC9 309 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 LINC00470Q9BZP3 86 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF443Q9Y2A4 671 aaPredicted RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 LY96Q9Y6Y9 160 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 TEX15Q9BXT5 2789 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 IGHV6-1A0A0B4J1U7 121 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 A0A1B0GVX0 72 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PSPHP1O15172 72 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 LSM8O95777 96 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CD7P09564 240 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SEC11BP0C7V7 166 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 UBBP0CG47 229 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SLC25A16P16260 332 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 KLK2P20151 261 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 CHRNB4P30926 498 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SULT1A1P50225 295 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RAB25P57735 213 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPS25P62851 125 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPS27AP62979 156 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 UBA52P62987 128 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SLC35B1P78383 322 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 NCMAPQ5T1S8 102 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OTPQ5XKR4 325 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR2T5Q6IEZ7 315 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 UEVLDQ8IX04 471 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR4C16Q8NGL9 310 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR2T29Q8NH02 315 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR2T27Q8NH04 317 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ABHD3Q8WU67 409 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ASB17Q8WXJ9 295 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 ARHGDIGQ99819 225 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPP21Q9H633 154 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 C1orf123Q9NWV4 160 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 HHLA2Q9UM44 414 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRBV7-3A0A075B6L6 115 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRAV9-1A0A075B6T8 112 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 IGKV1-6A0A0C4DH72 117 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 REM1O75628 298 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 NGFP01138 241 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 CALB1P05937 261 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 GPX1P07203 203 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR5AL1P0C617 328 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 BLVRBP30043 206 aaPredicted RBP1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPL3P39023 403 aaKnown RBP1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 LPAL2Q16609 132 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 ACSM3Q53FZ2 586 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 WDR38Q5JTN6 314 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 CLEC12AQ5QGZ9 265 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 KCNIP4Q6PIL6 250 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 Q8N377 158 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR5B3Q8NH48 314 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 ARL11Q969Q4 196 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 CCDC124Q96CT7 223 aaKnown RBP1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 PDCD1LG2Q9BQ51 273 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR51I1Q9H343 314 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 CCL28Q9NRJ3 127 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 TMEM106BQ9NUM4 274 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 HIGD1BQ9P298 99 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRAV19A0A0A6YYK7 116 aa1.2□□□□□ -2.22
SMARCAD1-202ENST00000359052 GNG14A0A1W2PPG7 69 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms