RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NMSQ5H8A3 153 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 WFDC3Q8IUB2 231 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 TUSC5Q8IXB3 177 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 C18orf15Q96N68 181 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 BVES-AS1Q5T3Y7 98 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 CIARTQ8N365 385 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 RFNGQ9Y644 331 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 MGST3O14880 152 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 HBDP02042 147 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV2-26A0A0B4J1V2 119 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 A0A0A6YYD4 124 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGKV1D-13A0A0B4J2D9 117 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 C9JCJ5 164 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGKV1-13P0DP09 117 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 EVI2AP22794 236 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 FAM89BQ8N5H3 189 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 TRAV8-1A0A0A6YYK1 113 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGFBP2P18065 325 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 FAM60AQ9NP50 221 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SMPXQ9UHP9 88 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 C17orf98A8MV24 154 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 PRTN3P24158 256 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 GFRA1P56159 465 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 OR4C13Q8NGP0 309 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IFI27L2Q9H2X8 130 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 LINC01549A6NIU2 74 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 NDUFB3O43676 98 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SYNGR3O43761 229 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF83P51522 516 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 EGR4Q05215 589 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV5-51A0A0C4DH38 117 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV2-70DA0A0C4DH43 119 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE12HA6NDE8 117 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF146Q15072 292 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ZADH2Q8N4Q0 377 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 GPR82Q96P67 336 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SIGLEC12Q96PQ1 595 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 FCGR2BP31994 310 aaPredicted RBP5.12□□□□□ -1.59
VPS13B-203ENST00000358544 CIRBPQ14011 172 aaKnown RBP5.12□□□□□ -1.59
VPS13B-203ENST00000358544 PRDM14Q9GZV8 571 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV3-21A0A0B4J1V1 117 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 H3BRM9 83 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 LHFPL1Q86WI0 220 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 TIMP4Q99727 224 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SEPSECSQ9HD40 501 aaKnown RBP5.12□□□□□ -1.59
VPS13B-203ENST00000358544 CALYQ9NYX4 217 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 HGFACQ04756 655 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SFTA2Q6UW10 78 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 LOC285556D6RIA3 1793 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 NUP210Q8TEM1 1887 aaPredicted RBP5.12□□□□□ -1.59
VPS13B-203ENST00000358544 SPRY3O43610 288 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 LIFP15018 202 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 PSG4Q00888 419 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 ASCL4Q6XD76 172 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 VKORC1Q9BQB6 163 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 PGPEP1Q9NXJ5 209 aa5.12□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PS18 150 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 FOXL2P58012 376 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CFAP161Q6P656 301 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 PAQR4Q8N4S7 273 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-203ENST00000358544 DLX6P56179 175 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 C19orf54Q5BKX5 351 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 VKORC1L1Q8N0U8 176 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CCL3P10147 92 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 NPIPB3Q92617 1050 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 ONECUT1Q9UBC0 465 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 MRPS18CQ9Y3D5 142 aaKnown RBP5.11□□□□□ -1.59
VPS13B-203ENST00000358544 SSTR5P35346 364 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 AICDAQ9GZX7 198 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 OTORQ9NRC9 128 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 IGKCP01834 107 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 APELAP0DMC3 54 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 VOPP1Q96AW1 172 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 NHSL1Q5SYE7 1610 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 IGKV1-9A0A0C4DH69 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 SPINT1O43278 529 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 Q6ZVH6 145 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM196Q5HYL7 178 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 DGAT2L7PQ6IED9 249 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 R4GN57 208 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE12JA6NER3 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 SH2D7A6NKC9 451 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE7O76087 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 DNAL4O96015 105 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CELA2BP08218 269 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE12FP0CL80 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE12GP0CL81 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE12IP0CL82 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 CCL7P80098 99 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 GAGE4Q13068 117 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 ATXN8Q156A1 80 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 MDP1Q86V88 176 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 DEPPQ9NTK1 212 aa5.11□□□□□ -1.59
VPS13B-203ENST00000358544 TRBV20OR9-2A0A075B6H5 130 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms