RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 BET1LQ9NYM9 111 aa14.16□□□□□ -0.14
NPAS3-202ENST00000356141 LOC102723971A0A1B0GUV8 181 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
NPAS3-202ENST00000356141 RNASE2P10153 161 aaKnown RBP14.15□□□□□ -0.14
NPAS3-202ENST00000356141 OR10J1P30954 320 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 ZNF343Q6P1L6 599 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 DTX2Q86UW9 622 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 PDPNQ86YL7 162 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 OR1L8Q8NGR8 309 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 NEU4Q8WWR8 484 aaPredicted RBP14.15□□□□□ -0.14
NPAS3-202ENST00000356141 C17orf112F2Z3M2 114 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 HBE1P02100 147 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 IL3RAP26951 378 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 KLF17Q5JT82 389 aaPredicted RBP14.15□□□□□ -0.14
NPAS3-202ENST00000356141 PERPQ96FX8 193 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 NPVFQ9HCQ7 196 aa14.15□□□□□ -0.14
NPAS3-202ENST00000356141 MOSP00540 346 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 ARL14EPLP0DKL9 152 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 ATP5G3P48201 142 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 VMA21Q3ZAQ7 101 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 TEPPQ6URK8 271 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 S100A7AQ86SG5 101 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 ACTR3CQ9C0K3 210 aaPredicted RBP14.14□□□□□ -0.15
NPAS3-202ENST00000356141 FNDC4Q9H6D8 234 aaPredicted RBP14.14□□□□□ -0.15
NPAS3-202ENST00000356141 NDUFA4L2Q9NRX3 87 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 FLNBO75369 2602 aaKnown RBP14.14□□□□□ -0.15
NPAS3-202ENST00000356141 CCDC168Q8NDH2 2452 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 ZNF90Q03938 601 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 UHRF2Q96PU4 802 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 PGPEP1LA6NFU8 196 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 FAM90A9PA6NNJ1 464 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 NCBP2LA6PVI3 153 aaKnown RBP14.14□□□□□ -0.15
NPAS3-202ENST00000356141 PHOX2AO14813 284 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 CNIH1O95406 144 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 IGHV4-39P01824 125 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 OR10J4P0C629 311 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 CDX1P47902 265 aaPredicted RBP14.14□□□□□ -0.15
NPAS3-202ENST00000356141 DMRTA1Q5VZB9 504 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 NPIPB3Q92617 1050 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 P2RX4Q99571 388 aa14.14□□□□□ -0.15
NPAS3-202ENST00000356141 HECTD1Q9ULT8 2610 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 HOXA5P20719 270 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 HTR1DP28221 377 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 MRGPRG-AS1Q2M3A8 158 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 COMMD1Q8N668 190 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 KIR3DL3Q8N743 410 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 MAPK1IP1LQ8NDC0 245 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 CUBNO60494 3623 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
NPAS3-202ENST00000356141 DLK1P80370 383 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 ERHP84090 104 aaKnown RBP14.13□□□□□ -0.15
NPAS3-202ENST00000356141 PSG5Q15238 335 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 POU2AF1Q16633 256 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 VWC2Q2TAL6 325 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 ACOT6Q3I5F7 207 aaPredicted RBP14.13□□□□□ -0.15
NPAS3-202ENST00000356141 ZNF506Q5JVG8 444 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 FAM78BQ5VT40 261 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 MIR17HGQ75NE6 70 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 DERL1Q9BUN8 251 aa14.13□□□□□ -0.15
NPAS3-202ENST00000356141 NAV2Q8IVL1 2488 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 CTXND1A0A1B0GTU2 59 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 NDUFS8O00217 210 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 CD81P60033 236 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 LINC00311Q8N616 119 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 SOX21Q9Y651 276 aaPredicted RBP14.12□□□□□ -0.15
NPAS3-202ENST00000356141 DOPEY2Q9Y3R5 2298 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 TMEM30BQ3MIR4 351 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 NECAP1Q8NC96 275 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 MBD3L1Q8WWY6 194 aa14.12□□□□□ -0.15
NPAS3-202ENST00000356141 TRAV5A0A0B4J249 113 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 CYB5BO43169 146 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 EFNA4P52798 201 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 MORN5Q5VZ52 161 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 OR5B3Q8NH48 314 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 TMEM167AQ8TBQ9 72 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 TMEM208Q9BTX3 173 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 MFAP2P55001 183 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 ASPHD1Q5U4P2 390 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 SIGLEC9Q9Y336 463 aa14.11□□□□□ -0.15
NPAS3-202ENST00000356141 ZNF469Q96JG9 3925 aaPredicted RBP14.11□□□□□ -0.15
NPAS3-202ENST00000356141 MDKP21741 143 aaPredicted RBP14.1□□□□□ -0.15
NPAS3-202ENST00000356141 SP5Q6BEB4 398 aaPredicted RBP14.1□□□□□ -0.15
NPAS3-202ENST00000356141 ZNF596Q8TC21 504 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 CCL19Q99731 98 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 UBR5O95071 2799 aaPredicted RBP14.1□□□□□ -0.15
NPAS3-202ENST00000356141 DLEU1O43261 78 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 S100A7P31151 101 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 MC5RP33032 325 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 RPS10P46783 165 aaKnown RBP14.1□□□□□ -0.15
NPAS3-202ENST00000356141 RND2P52198 227 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 ADIRFQ15847 76 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 TPTE2P1Q5T6R2 138 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 FAM90A2PQ658T7 463 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 PPP1R27Q86WC6 154 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 NIPSNAP3BQ9BS92 247 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 H3BTX0 84 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 RPL27AP46776 148 aaKnown RBP14.1□□□□□ -0.15
NPAS3-202ENST00000356141 PRSS8Q16651 343 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 FAM120AOSQ5T036 256 aa14.1□□□□□ -0.15
NPAS3-202ENST00000356141 GFI1BQ5VTD9 330 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms