RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 STRCQ7RTU9 1775 aa12.41□□□□□ -0.42
LMX1B-201ENST00000355497 NINQ8N4C6 2090 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 LINC01549A6NIU2 74 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 MORN2Q502X0 79 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 IFI27L1Q96BM0 104 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 CNTRLQ7Z7A1 2325 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 A0A1W2PRS3 328 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 PRTN3P24158 256 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 LAGE3Q14657 143 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-201ENST00000355497 OR9G4Q8NGQ1 327 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 MGST2Q99735 147 aa12.4□□□□□ -0.42
LMX1B-201ENST00000355497 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 F8WEM9 126 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 RAMP3O60896 148 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 ZNF415Q09FC8 603 aa12.4□□□□□ -0.43
LMX1B-201ENST00000355497 ZNF362Q5T0B9 420 aaPredicted RBP12.4□□□□□ -0.43
LMX1B-201ENST00000355497 CDKN1AP38936 164 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 PRCDQ00LT1 54 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 FOXL1Q12952 345 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 OCC1Q8TAD7 63 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 JPT2Q9H910 190 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 DEPPQ9NTK1 212 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-201ENST00000355497 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 CD55P08174 381 aa12.39□□□□□ -0.43
LMX1B-201ENST00000355497 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BKO60814 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BJP06899 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BOP23527 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BBP33778 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BDP58876 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BCP62807 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 EFNB3Q15768 340 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST2H2BEQ16778 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BHQ93079 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BNQ99877 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BMQ99879 126 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
LMX1B-201ENST00000355497 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 ZNF638Q14966 1978 aaKnown RBP12.38□□□□□ -0.43
LMX1B-201ENST00000355497 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
LMX1B-201ENST00000355497 UBE2CO00762 179 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 OR9G9P0C7N8 305 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 PRADC1Q9BSG0 188 aa12.38□□□□□ -0.43
LMX1B-201ENST00000355497 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 F8VVB4 439 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 F8VWA3 439 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 GZMBP10144 247 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 TRAV5A0A0B4J249 113 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 PAX8Q06710 450 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 TEX38Q6PEX7 206 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 C9orf106Q8NAJ2 232 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
LMX1B-201ENST00000355497 ZXDCQ2QGD7 858 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-201ENST00000355497 WBP1Q96G27 269 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-201ENST00000355497 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
LMX1B-201ENST00000355497 COX11Q9Y6N1 276 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 ASCC3Q8N3C0 2202 aaKnown RBP12.36□□□□□ -0.43
LMX1B-201ENST00000355497 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 OCIAD2Q56VL3 154 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 ASCL4Q6XD76 172 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 RNASE6Q93091 150 aaKnown RBP12.36□□□□□ -0.43
LMX1B-201ENST00000355497 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.36□□□□□ -0.43
LMX1B-201ENST00000355497 CCL1P22362 96 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 CD24P25063 80 aa12.36□□□□□ -0.43
LMX1B-201ENST00000355497 TMEM8BA6NDV4 472 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 A6NNC1 897 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 THBDP07204 575 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 PLEKHB2Q96CS7 222 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 LYZL4Q96KX0 146 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
LMX1B-201ENST00000355497 CSRP2Q16527 193 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 SHANK3Q9BYB0 1731 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 BTCP35070 178 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms