RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 Q8NAQ8 132 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 OR52I2Q8NH67 350 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 IGHV4-28A0A0C4DH34 117 aa11.48□□□□□ -0.57
DDX55-202ENST00000354291 PIGPP57054 158 aa11.48□□□□□ -0.57
DDX55-202ENST00000354291 RNASE12Q5GAN4 147 aaKnown RBP11.48□□□□□ -0.57
DDX55-202ENST00000354291 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
DDX55-202ENST00000354291 ZFAND1Q8TCF1 268 aa11.48□□□□□ -0.57
DDX55-202ENST00000354291 DEFB131BA0A096LNP1 70 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 I3L2K1 104 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 SMIM18P0DKX4 95 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 PI3P19957 117 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 ZNF767PQ75MW2 155 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 ABHD1Q96SE0 405 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
DDX55-202ENST00000354291 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 B3GALNT1O75752 331 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 YIF1AO95070 293 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 MT-CO2P00403 227 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 IFNA21P01568 189 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 IFNA17P01571 189 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 SNCAP37840 140 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 AKR1C2P52895 323 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 TAS2R19P59542 299 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 UBE2DNLQ8IWF7 75 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 CCDC71LQ8N9Z2 235 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 TMEM229BQ8NBD8 167 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 OR10C1Q96KK4 312 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 TP53RKQ96S44 253 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 RNF2Q99496 336 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 MRPS26Q9BYN8 205 aaKnown RBP11.46□□□□□ -0.57
DDX55-202ENST00000354291 COPZ2Q9P299 210 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 SMPXQ9UHP9 88 aa11.46□□□□□ -0.57
DDX55-202ENST00000354291 GABARAPH6UMI1 98 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 RGS5O15539 181 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 GNG7O60262 68 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 RAB3DO95716 219 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 AMBPP02760 352 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 CD74P04233 296 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 MRPS10P82664 201 aaKnown RBP11.45□□□□□ -0.58
DDX55-202ENST00000354291 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
DDX55-202ENST00000354291 SCGB2B2Q4G0G5 96 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 Q6ZR54 194 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
DDX55-202ENST00000354291 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
DDX55-202ENST00000354291 NXF2Q9GZY0 626 aaKnown RBP11.45□□□□□ -0.58
DDX55-202ENST00000354291 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
DDX55-202ENST00000354291 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 A0A0B4J293 547 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 IGHV7-4-1A0A0J9YVY3 117 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 INS-IGF2F8WCM5 200 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 IGKV1-5P01602 117 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 P0C879 139 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 NPBWR1P48145 328 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 PPP5CP53041 499 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 SUB1P53999 127 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX55-202ENST00000354291 IZUMO4Q1ZYL8 232 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 TRIM16LQ309B1 348 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 STEAP1BQ6NZ63 245 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 DUSP18Q8NEJ0 188 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 RRNAD1Q96FB5 475 aaKnown RBP11.44□□□□□ -0.58
DDX55-202ENST00000354291 RHPN1-AS1Q9BWJ2 59 aa11.44□□□□□ -0.58
DDX55-202ENST00000354291 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 CHEK1O14757 476 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 ST8SIA3O43173 380 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 IGHV3-48P01763 117 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 CD5P06127 495 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 MIFP14174 115 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 MEF2DQ14814 521 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 SP6Q3SY56 376 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 SPINK9Q5DT21 86 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 LEMD1Q68G75 181 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 Q6ZRM9 215 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 OR13C8Q8NGS7 320 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
DDX55-202ENST00000354291 CORTO00230 105 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 CTDSP2O14595 271 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 UCP1P25874 307 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 ALDH3B2P48448 385 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 MARCH1Q8TCQ1 289 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 ZNF414Q96IQ9 312 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 ENY2Q9NPA8 101 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 RABL2AQ9UBK7 228 aaPredicted RBP11.42□□□□□ -0.58
DDX55-202ENST00000354291 RABL2BQ9UNT1 228 aa11.42□□□□□ -0.58
DDX55-202ENST00000354291 DISC1C4P0D8 188 aa11.41□□□□□ -0.58
DDX55-202ENST00000354291 ETV6P41212 452 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms