RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 COQ2Q96H96 371 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 OR51B2Q9Y5P1 312 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 ARFGEF3Q5TH69 2177 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 RBPJQ06330 500 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 SPINK14Q6IE38 97 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 LINC00696Q6ZRV3 163 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 IMMP1LQ96LU5 166 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 TMUB1Q9BVT8 246 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 THYN1Q9P016 225 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 F11RQ9Y624 299 aaKnown RBP6.26□□□□□ -1.41
BRCA1-201ENST00000352993 LOC102723996A0A087X1L8 192 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 J3QR06 171 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PEX7O00628 323 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 P01737 135 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 FOLR3P41439 243 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 HSPE1P61604 102 aaKnown RBP6.25□□□□□ -1.41
BRCA1-201ENST00000352993 SEC11AP67812 179 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 MRPL14Q6P1L8 145 aaKnown RBP6.25□□□□□ -1.41
BRCA1-201ENST00000352993 RASL11AQ6T310 242 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 Q6ZR03 302 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 SPEM1Q8N4L4 309 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 OR4A5Q8NH83 315 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 Q8TCH9 128 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 ZNF503Q96F45 646 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 C1orf159Q96HA4 380 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 IGF2BP2-AS1Q96M15 143 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PAXXQ9BUH6 204 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-201ENST00000352993 H3BTX0 84 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 CELA3AP09093 270 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 BMI1P35226 326 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 CYB561P49447 251 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PRR20EP86478 221 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PRR20CP86479 221 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PRR20DP86480 221 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PRR20BP86481 221 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PRR20AP86496 221 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 FOXE3Q13461 319 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 GUSBP1Q15486 140 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 FA2HQ7L5A8 372 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-201ENST00000352993 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 IDI2-AS1Q9NZ38 188 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 CFAP54Q96N23 3096 aa6.25□□□□□ -1.41
BRCA1-201ENST00000352993 PINLYPA6NC86 204 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 C21orf140B9A014 251 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 SRFP11831 508 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 AZU1P20160 251 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 NMUP48645 174 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 MEF2CQ06413 473 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 EIF4EBP1Q13541 118 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 TMEM177Q53S58 311 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 RBMXL3Q8N7X1 1067 aaKnown RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 CHCHD1Q96BP2 118 aaKnown RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 LOXL2Q9Y4K0 774 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 A8MWL6 223 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 PRSS46E5RG02 174 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 FABP2P12104 132 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 TMPRSS3P57727 454 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 ERVK11-1P61568 191 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 ADTRPQ96IZ2 230 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 JMJD8Q96S16 334 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 ZNF835Q9Y2P0 537 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 PPIAL4CA0A0B4J2A2 164 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 TEX50A0A1B0GTY4 177 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 K7EP34 96 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 TIMM8AO60220 97 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 OR2J3O76001 311 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 APOHP02749 345 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 ADH4P08319 380 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 PPIAL4GP0DN37 164 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 COX8AP10176 69 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 CD46P15529 392 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 NRN1LQ496H8 165 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 DHRS13Q6UX07 377 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 SLC25A33Q9BSK2 321 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 RABAC1Q9UI14 185 aa6.24□□□□□ -1.41
BRCA1-201ENST00000352993 BOKQ9UMX3 212 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 KLF13Q9Y2Y9 288 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-201ENST00000352993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.23□□□□□ -1.41
BRCA1-201ENST00000352993 PGPA6NDG6 321 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 C15orf61A6NNL5 157 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 C2CD4DB7Z1M9 353 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 SP1P08047 785 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 CYC1P08574 325 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-201ENST00000352993 CCL4P13236 92 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 VSTM2AQ8TAG5 236 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 H1FXQ92522 213 aaKnown RBP6.23□□□□□ -1.41
BRCA1-201ENST00000352993 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 A0A1B0GV72 72 aa6.23□□□□□ -1.41
BRCA1-201ENST00000352993 A1L4Q6 167 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms