RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DKK4Q9UBT3 224 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 RFNGQ9Y644 331 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 DOCK11Q5JSL3 2073 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 IGKV1-6A0A0C4DH72 117 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.613e-6■■■■□ 22.3
SMC6-201ENST00000351948 APCSP02743 223 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 SAA4P35542 130 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 CENPWQ5EE01 88 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 J3QKU1 62 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 PYYP10082 97 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
SMC6-201ENST00000351948 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 FAM74A4Q5TZK3 123 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 BIVMQ86UB2 503 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 Q5PR19 223 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 TEX45Q8NA69 505 aa11.24□□□□□ -0.61
SMC6-201ENST00000351948 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
SMC6-201ENST00000351948 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 NPFFO15130 113 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 PSG9Q00887 426 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 TMEM144Q7Z5S9 345 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 ISLRO14498 428 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 CD69Q07108 199 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 ANKRD11Q6UB99 2663 aaPredicted RBP11.23□□□□□ -0.61
SMC6-201ENST00000351948 SOD3P08294 240 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 PRSS8Q16651 343 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 IGFL2Q6UWQ7 119 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 TMEM116Q8NCL8 245 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 NAV2Q8IVL1 2488 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 DSCR9P59020 149 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
SMC6-201ENST00000351948 H0YJW9 148 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 IGLV1-44P01699 117 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 ANOS1P23352 680 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 RRN3P1Q2M238 152 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 RAX2Q96IS3 184 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 CEACAM4O75871 244 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 VSIRQ9H7M9 311 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 GGCTO75223 188 aaKnown RBP11.22□□□□□ -0.61
SMC6-201ENST00000351948 MAS1LP35410 378 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 GNG5P63218 68 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 C9JCJ5 164 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 GGACTQ9BVM4 153 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 TRGC2P03986 189 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 PRO1933Q9H354 126 aa11.22□□□□□ -0.61
SMC6-201ENST00000351948 AP4M1O00189 453 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 ZNF841Q6ZN19 808 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 VAMP8Q9BV40 100 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 RNF125Q96EQ8 232 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 Q96MF0 132 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 SMDT1Q9H4I9 107 aa11.21□□□□□ -0.61
SMC6-201ENST00000351948 RPL29P47914 159 aaKnown RBP11.21□□□□□ -0.62
SMC6-201ENST00000351948 BET1LQ9NYM9 111 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 TRAV5A0A0B4J249 113 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 SLC17A3O00476 420 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 MLANAQ16655 118 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 Q6ZRM9 215 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 MOB4Q9Y3A3 225 aa11.21□□□□□ -0.62
SMC6-201ENST00000351948 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 NRGNQ92686 78 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 M0QZK8 103 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 MMP23AO75900 390 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 AGAP20933 346 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 RAB9AP51151 201 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
SMC6-201ENST00000351948 CD33P20138 364 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 EMP1P54849 157 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 TCRBV4S1A1TA0A5B7 111 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 E9PQ18 207 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 AREGP15514 252 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMC6-201ENST00000351948 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 316.4 ms