RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
TRA2B-202ENST00000342294 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 TEX48A0A1B0GUV7 120 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 HSPE1P61604 102 aaKnown RBP11.93□□□□□ -0.5
TRA2B-202ENST00000342294 TBCEQ15813 527 aaPredicted RBP11.93□□□□□ -0.5
TRA2B-202ENST00000342294 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 YTHDF1Q9BYJ9 559 aaKnown RBP11.93□□□□□ -0.5
TRA2B-202ENST00000342294 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
TRA2B-202ENST00000342294 DAPK2Q9UIK4 370 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
TRA2B-202ENST00000342294 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
TRA2B-202ENST00000342294 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
TRA2B-202ENST00000342294 GLMPQ8WWB7 406 aa11.92□□□□□ -0.5
TRA2B-202ENST00000342294 AUNIPQ9H7T9 357 aa11.92□□□□□ -0.5
TRA2B-202ENST00000342294 DNAH5Q8TE73 4624 aa11.92□□□□□ -0.5
TRA2B-202ENST00000342294 FAM90A26D6RGX4 464 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 IGKV1-39P01597 117 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 IGKV1D-39P04432 117 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 HTN3P15516 51 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 SPATA12Q7Z6I5 190 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
TRA2B-202ENST00000342294 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-202ENST00000342294 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
TRA2B-202ENST00000342294 CLN5O75503 358 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 EIF2B2P49770 351 aaKnown RBP11.9□□□□□ -0.5
TRA2B-202ENST00000342294 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 OR5H6Q8NGV6 325 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 NARS2Q96I59 477 aaKnown RBP11.9□□□□□ -0.5
TRA2B-202ENST00000342294 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-202ENST00000342294 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-202ENST00000342294 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
TRA2B-202ENST00000342294 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
TRA2B-202ENST00000342294 A0A0A6YYH2 397 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 A6NJ64 397 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 GPR31O00270 319 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 CBX5P45973 191 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 RFX2P48378 723 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 AP2S1P53680 142 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-202ENST00000342294 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
TRA2B-202ENST00000342294 MLANAQ16655 118 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 H2BFWTQ7Z2G1 175 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 TMEM230Q96A57 120 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 FXYD6Q9H0Q3 95 aa11.89□□□□□ -0.51
TRA2B-202ENST00000342294 TXNL4BQ9NX01 149 aaKnown RBP11.89□□□□□ -0.51
TRA2B-202ENST00000342294 SNCAP37840 140 aa11.88□□□□□ -0.51
TRA2B-202ENST00000342294 SCAND1P57086 179 aa11.88□□□□□ -0.51
TRA2B-202ENST00000342294 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
TRA2B-202ENST00000342294 VCXQ9H320 206 aa11.88□□□□□ -0.51
TRA2B-202ENST00000342294 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 EPM2AB3EWF7 344 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 RNASE2P10153 161 aaKnown RBP11.87□□□□□ -0.51
TRA2B-202ENST00000342294 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 TIGITQ495A1 244 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 ANAPC10Q9UM13 185 aa11.87□□□□□ -0.51
TRA2B-202ENST00000342294 YTHDF2Q9Y5A9 579 aaKnown RBP11.87□□□□□ -0.51
TRA2B-202ENST00000342294 CORTO00230 105 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 NKX2-1P43699 371 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-202ENST00000342294 RPL5P46777 297 aaKnown RBP11.86□□□□□ -0.51
TRA2B-202ENST00000342294 FXYD7P58549 80 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 IZUMO4Q1ZYL8 232 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 GDF5OSQ5U4N7 250 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
TRA2B-202ENST00000342294 PMP2P02689 132 aa11.85□□□□□ -0.51
TRA2B-202ENST00000342294 HNRNPCP07910 306 aaKnown RBP eCLIP11.85□□□□□ -0.511e-5■□□□□ 9.8
TRA2B-202ENST00000342294 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
TRA2B-202ENST00000342294 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-202ENST00000342294 PHLDA2Q53GA4 152 aa11.85□□□□□ -0.51
TRA2B-202ENST00000342294 C1orf158Q8N1D5 194 aa11.85□□□□□ -0.51
TRA2B-202ENST00000342294 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 NAT1P18440 290 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRA2B-202ENST00000342294 DEFB1P60022 68 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 DAD1P61803 113 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 GSG1LQ6UXU4 331 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 IFT46Q9NQC8 304 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 DIABLOQ9NR28 239 aa11.84□□□□□ -0.51
TRA2B-202ENST00000342294 A0A0B4J293 547 aa11.83□□□□□ -0.52
TRA2B-202ENST00000342294 BUB3O43684 328 aa11.83□□□□□ -0.52
TRA2B-202ENST00000342294 SCGB2A1O75556 95 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms