RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 J3QW42 95 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 CFHR1Q03591 330 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 FAM71F2Q6NXP2 309 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 HAPLN4Q86UW8 402 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 NPIPB3Q92617 1050 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 LYZL4Q96KX0 146 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 H3BVH4 76 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 PSG7Q13046 419 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 EFNA2O43921 213 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CLDN18P56856 261 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 LRRK1Q38SD2 2015 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 A0A0G2JRQ6 117 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 LIPFP07098 398 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 HOXA4Q00056 320 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CCDC144NLQ6NUI1 221 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 DPF1Q92782 380 aa13.42□□□□□ -0.26
NPHP3-201ENST00000337331 CECR9P0C854 216 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SEC11AP67812 179 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 PGLYRP4Q96LB8 373 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 REG1AP05451 166 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 HSD52Q0P140 79 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SLC25A33Q9BSK2 321 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 RPL7P18124 248 aaKnown RBP13.41□□□□□ -0.26
NPHP3-201ENST00000337331 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 UBTD1Q9HAC8 227 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 SCGB1D4Q6XE38 83 aa13.41□□□□□ -0.26
NPHP3-201ENST00000337331 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 TSSC4Q9Y5U2 329 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 IGKV1D-33P01593 117 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 IGKV1-33P01594 117 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 CCL1P22362 96 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR13A1Q8NGR1 328 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 KLF7O75840 302 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 SP9P0CG40 484 aa13.4□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF48Q96MX3 618 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
NPHP3-201ENST00000337331 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
NPHP3-201ENST00000337331 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 TMEM177Q53S58 311 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 ACP7Q6ZNF0 438 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 Q6ZRM9 215 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 HTN1P15515 57 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 PAX9P55771 341 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 CHODLQ9H9P2 273 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 TOMM40O96008 361 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 GLRXP35754 106 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 SPANXN1Q5VSR9 72 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 WDR31Q8NA23 367 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 BVES-AS1Q5T3Y7 98 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 SFXN3Q9BWM7 321 aa13.39□□□□□ -0.27
NPHP3-201ENST00000337331 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 ANAPC10Q9UM13 185 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 VWA8A3KMH1 1905 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
NPHP3-201ENST00000337331 CELA3BP08861 270 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 OR9G1Q8NH87 305 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
NPHP3-201ENST00000337331 FCGR2BP31994 310 aaPredicted RBP13.38□□□□□ -0.27
NPHP3-201ENST00000337331 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 AP5S1Q9NUS5 200 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 TRAV8-6A0A0B4J262 113 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IGKV1-12A0A0C4DH73 117 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IZUMO1RA6ND01 250 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 IGKV1D-12P01611 117 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 KIR3DS1Q14943 382 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 ZNF146Q15072 292 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-201ENST00000337331 PCSK4Q6UW60 755 aa13.37□□□□□ -0.27
NPHP3-201ENST00000337331 MMP23AO75900 390 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 MGPP08493 103 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 WFDC3Q8IUB2 231 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 SRSF12Q8WXF0 261 aaKnown RBP13.36□□□□□ -0.27
NPHP3-201ENST00000337331 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
NPHP3-201ENST00000337331 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 MOSP00540 346 aa13.36□□□□□ -0.27
NPHP3-201ENST00000337331 FAM27E3Q08E93 113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms