RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 JKAMPQ9P055 326 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 SPTBN5Q9NRC6 3674 aaKnown RBP9.74□□□□□ -0.85
HDAC6-201ENST00000334136 IGHV2-5P01817 119 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 TFF1P04155 84 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 GATA2P23769 480 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-201ENST00000334136 ADMP35318 185 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 STPG3Q8N7X2 389 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 LOC389332A0A1B0GUA5 103 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
HDAC6-201ENST00000334136 K7ERU9 68 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 TNXAQ16473 311 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 BPIFA4PQ86YQ2 179 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 SPOCK3Q9BQ16 436 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 PRNDQ9UKY0 176 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 PRSS1P07477 247 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 C1orf147Q96MC9 270 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-201ENST00000334136 LIME1Q9H400 295 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 EXPH5Q8NEV8 1989 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 SNAI2O43623 268 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 KIR2DS2P43631 304 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 RELBQ01201 579 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 DAZAP2Q15038 168 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-201ENST00000334136 RPL39P5Q59GN2 51 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 C10orf91Q5T1B1 145 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 ADTRPQ96IZ2 230 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 NABP2Q9BQ15 211 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 A0A1B0GUS0 222 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 EREGO14944 169 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 NUTF2P61970 127 aaKnown RBP9.73□□□□□ -0.85
HDAC6-201ENST00000334136 MMDQ15546 238 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 PLPPR1Q8TBJ4 325 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 IDI2-AS1Q9NZ38 188 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 A0A0G2JRQ6 117 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 PMCHL1Q16048 86 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 RAB37Q96AX2 223 aa9.73□□□□□ -0.85
HDAC6-201ENST00000334136 LAMA1P25391 3075 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 A0A1W2PN81 502 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 PGPA6NDG6 321 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 C19orf84I3L1E1 186 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 COMPP49747 757 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-201ENST00000334136 NMSQ5H8A3 153 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 HCP5Q6MZN7 132 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 TEX29Q8N6K0 151 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-201ENST00000334136 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
HDAC6-201ENST00000334136 SEBOXQ9HB31 216 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-201ENST00000334136 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 ARHGAP21Q5T5U3 1957 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 IGHV3-72A0A0B4J1Y9 119 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 F2RL2O00254 374 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 TMEM50AO95807 157 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 FAM90A2PQ658T7 463 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 OCC1Q8TAD7 63 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 PGLYRP4Q96LB8 373 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 NRN1Q9NPD7 142 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 MAS1LP35410 378 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 PRR31Q5SQ13 230 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 BPESC1Q9GZL8 116 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 AAMDCQ9H7C9 122 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 IL36BQ9NZH7 164 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 SELENOKQ9Y6D0 94 aa9.72□□□□□ -0.85
HDAC6-201ENST00000334136 TRAV24A0A0B4J272 114 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 SELLP14151 372 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 NMUP48645 174 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 HSPE1P61604 102 aaKnown RBP9.71□□□□□ -0.85
HDAC6-201ENST00000334136 MEF2CQ06413 473 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-201ENST00000334136 Q6ZRM9 215 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 OR1L8Q8NGR8 309 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 NEU1Q99519 415 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 DSCAMO60469 2012 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 A8MWL6 223 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 IL6RP08887 468 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-201ENST00000334136 PRNTQ86SH4 94 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 NCKAP5O14513 1909 aa9.71□□□□□ -0.85
HDAC6-201ENST00000334136 GAGE10A6NGK3 116 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 C22orf34Q6ZV56 151 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 C5orf17Q8NAS9 161 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 NDFIP1Q9BT67 221 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM242Q9NWH2 141 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 CORTO00230 105 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 IGFBP2P18065 325 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 CFPP27918 469 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 ZNF146Q15072 292 aa9.71□□□□□ -0.86
HDAC6-201ENST00000334136 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms