RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FCER2P06734 321 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 SERPINE2P07093 398 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 LINC00614P0C842 121 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 STAG3L2P0CL84 134 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 TRAPPC2P0DI81 140 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 TRAPPC2BP0DI82 140 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 GCSHP23434 173 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 TMBIM6P55061 237 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 SURF2Q15527 256 aaPredicted RBP4.8□□□□□ -1.64
SMG1-201ENST00000330588 FAM106AQ4KMX7 169 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 ZNF585BQ52M93 769 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 SMIM15Q7Z3B0 74 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 LHFPL1Q86WI0 220 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 SGPP2Q8IWX5 399 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 VKORC1L1Q8N0U8 176 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 OR51H1Q8NH63 302 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 ZFAND1Q8TCF1 268 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 LSM10Q969L4 123 aaKnown RBP4.8□□□□□ -1.64
SMG1-201ENST00000330588 TMEM56Q96MV1 263 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
SMG1-201ENST00000330588 NAGKQ9UJ70 344 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 NOTCH3Q9UM47 2321 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 MEIS3P1A6NDR6 274 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 C15orf61A6NNL5 157 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 FAM25AB3EWG3 89 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 FAM25CB3EWG5 89 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 FAM25GB3EWG6 89 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 GABARAPH6UMI1 98 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 HPGDSO60760 199 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 SNAPC5O75971 98 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 OR2J3O76001 311 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 ATG12O94817 140 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 TRBV12-3P01733 135 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 RLN1P04808 185 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 C8orf88P0DMB2 117 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 AREGP15514 252 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 FCGR2BP31994 310 aaPredicted RBP4.79□□□□□ -1.64
SMG1-201ENST00000330588 LPAR6P43657 344 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 RNASE10Q5GAN6 216 aaKnown RBP4.79□□□□□ -1.64
SMG1-201ENST00000330588 SSX9Q7RTT3 188 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 TMEM229BQ8NBD8 167 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 ZNF502Q8TBZ5 544 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 FCAMRQ8WWV6 532 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 SEC22AQ96IW7 307 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 ZNF436Q9C0F3 470 aaPredicted RBP4.79□□□□□ -1.64
SMG1-201ENST00000330588 VCX2Q9H322 139 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 OR51M1Q9H341 326 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 CACFD1Q9UGQ2 172 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
SMG1-201ENST00000330588 TNCP24821 2201 aa4.79□□□□□ -1.64
SMG1-201ENST00000330588 TEX50A0A1B0GTY4 177 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 C2orf70A6NJV1 201 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 C3orf84H3BNL1 204 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 NDUFB8O95169 186 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 FRMD6-AS1P0C7T7 363 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 IGHV4-30-4P0DP06 118 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 DEFA4P12838 97 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 MYOD1P15172 320 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 HLA-DMAP28067 261 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 TAS2R19P59542 299 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 MEF2DQ14814 521 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 C11orf87Q6NUJ2 197 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 FAM219AQ8IW50 185 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 CCDC71LQ8N9Z2 235 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 OR1P1Q8NH06 330 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 SMIM4Q8WVI0 70 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 DEDD2Q8WXF8 326 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 MRGPRFQ96AM1 343 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 BSCL2Q96G97 398 aaPredicted RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 FAM110AQ9BQ89 295 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 NAA50Q9GZZ1 169 aaKnown RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 CLEC5AQ9NY25 188 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 MGAT4CQ9UBM8 478 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 PIGBOS1A0A0B4J2F0 54 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 F8WDY8 70 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 K7EMT4 169 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 NDUFA4O00483 81 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 GSTZ1O43708 216 aaPredicted RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 KRASP01116 189 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 HLA-AP01891 365 aaKnown RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 PRH1P02810 166 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 P0C879 139 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 APELAP0DMC3 54 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 RPL5P46777 297 aaKnown RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 PRCDQ00LT1 54 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 DEFB114Q30KQ6 69 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 ANKRD55Q3KP44 614 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms