RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 LIPFP07098 398 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 VDAC2P45880 294 aaPredicted RBP10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 PPOXP50336 477 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 DEFB124Q8NES8 71 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 MRPL20Q9BYC9 149 aaKnown RBP10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 ZNF883P0CG24 379 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 RBPJQ06330 500 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 GPR82Q96P67 336 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 C10orf142B7Z368 130 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 GNG5P63218 68 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 PEAR1Q5VY43 1037 aaPredicted RBP10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 NEU1Q99519 415 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 ZNF257Q9Y2Q1 563 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 HTTP42858 3142 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 IGHV1-18A0A0C4DH31 117 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 TM4SF5O14894 197 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 TMEM11P17152 192 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 FCER1GP30273 86 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 VWC2Q2TAL6 325 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 A6NDN8 102 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 NUPR1O60356 82 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 NPSP0C0P6 89 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 SRSF12Q8WXF0 261 aaKnown RBP10.49□□□□□ -0.73
DNMT3A-202ENST00000321117 IGKV1D-17A0A075B6S4 117 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 J3QR89 54 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 IGLV2-14P01704 120 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 TIMM23BQ5SRD1 257 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 MDS2Q8NDY4 140 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 SLC25A33Q9BSK2 321 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 SCNM1Q9BWG6 230 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 YLPM1P49750 1951 aaKnown RBP10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 CPAMD8Q8IZJ3 1885 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 LOC389332A0A1B0GUA5 103 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 A0A1W2PS18 150 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 GOLT1AQ6ZVE7 132 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 TMEM186Q96B77 213 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 C2orf83Q53S99 150 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 UNQ5815/PRO19632Q6UWF5 114 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 SPOCK3Q9BQ16 436 aa10.48□□□□□ -0.73
DNMT3A-202ENST00000321117 AP5S1Q9NUS5 200 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 GNG7O60262 68 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 PLA2G5P39877 138 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 TCTAP57738 103 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 TSKUQ8WUA8 353 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 V9GYV3 84 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 PMS2P5A8MQ11 134 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 KIR2DL2P43627 348 aaPredicted RBP10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 UQCRFS1P47985 274 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 ASCL5Q7RTU5 278 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 ERASQ7Z444 233 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 SNRNP40Q96DI7 357 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 PCNX1Q96RV3 2341 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 GTF3C1Q12789 2109 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 SFTPCP11686 197 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 MBNL2Q5VZF2 373 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 PET117Q6UWS5 81 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 EPDR1Q9UM22 224 aa10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 SOX21Q9Y651 276 aaPredicted RBP10.47□□□□□ -0.73
DNMT3A-202ENST00000321117 GAGE10A6NGK3 116 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 C16orf97H3BN30 126 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 MLANAQ16655 118 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 RNFT1Q5M7Z0 435 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 NIT1Q86X76 327 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 MRPL27Q9P0M9 148 aaKnown RBP10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 PRR14LQ5THK1 2151 aa10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.73
DNMT3A-202ENST00000321117 TCRBV4S1A1TA0A5B7 111 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 F2RL2O00254 374 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 C1orf185Q5T7R7 199 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 TMEM136Q6ZRR5 245 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 RBPMS2Q6ZRY4 209 aaKnown RBP10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 RPUSD1Q9UJJ7 312 aaKnown RBP10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 LINC00312Q9Y6C7 94 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 CCL3L1P16619 93 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 LGALS7P47929 136 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 TPTE2P1Q5T6R2 138 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 TIMD4Q96H15 378 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 LINC00479Q96M42 142 aa10.46□□□□□ -0.74
DNMT3A-202ENST00000321117 F2Z2F3 143 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 M0R296 226 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms