RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 H7C1H1 209 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 GCGP01275 180 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 WT1P19544 449 aaPredicted RBP8.83□□□□□ -1
SYNPO2-201ENST00000307142 MUC21Q5SSG8 566 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 TRGV4A0A0C4DH28 118 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 SLC25A48Q6ZT89 311 aaKnown RBP8.83□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1D-13A0A0B4J2D9 117 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1-13P0DP09 117 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 FOSL1P15407 271 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 SULT1A2P50226 295 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 IQCJQ1A5X6 159 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 C9orf62Q8N4C0 152 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 GGACTQ9BVM4 153 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 OOSP1A8MZH6 123 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 TNFSF13O75888 250 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
SYNPO2-201ENST00000307142 MEF2BQ02080 365 aaPredicted RBP8.83□□□□□ -1
SYNPO2-201ENST00000307142 ZNF415Q09FC8 603 aa8.83□□□□□ -1
SYNPO2-201ENST00000307142 DUTP33316 252 aaKnown RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 MBNL3Q9NUK0 354 aaKnown RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 CEACAM8P31997 349 aaPredicted RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 RNF125Q96EQ8 232 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 CGAP01215 116 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 OR5AN1Q8NGI8 311 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 DEFB113Q30KQ7 82 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 ZNF324BQ6AW86 544 aaPredicted RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 PVRIGQ6DKI7 326 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 Q9H3A6 140 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 GPR179Q6PRD1 2367 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 TRBV7-1A0A0A6YYK4 115 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 GPX4P36969 197 aaPredicted RBP8.82□□□□□ -1
SYNPO2-201ENST00000307142 PKDREJQ9NTG1 2253 aa8.82□□□□□ -1
SYNPO2-201ENST00000307142 RBFOX2O43251 390 aaKnown RBP eCLIP8.81□□□□□ -1
SYNPO2-201ENST00000307142 PSPNO60542 156 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 GCSHP23434 173 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
SYNPO2-201ENST00000307142 CADP27708 2225 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 ROS1P08922 2347 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 NBASA2RRP1 2371 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1-27A0A075B6S5 117 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 UCP1P25874 307 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 RTBDNQ9BSG5 229 aaPredicted RBP8.81□□□□□ -1
SYNPO2-201ENST00000307142 TMEM191AQ9H0A3 160 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 BET1LQ9NYM9 111 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 PRR32B1ATL7 298 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 CXCL2P19875 107 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 TXNDC17Q9BRA2 123 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
SYNPO2-201ENST00000307142 GATA4P43694 442 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 FXYD7P58549 80 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 SUMO2P61956 95 aaKnown RBP8.81□□□□□ -1
SYNPO2-201ENST00000307142 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 IGHV1-69DA0A0B4J2H0 117 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 MUC21A0A0G2JKD1 596 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 MUC21A0A140T8X8 626 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 IGHV1-69P01742 117 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 DOCK10Q96BY6 2186 aa8.81□□□□□ -1
SYNPO2-201ENST00000307142 C5orf52A6NGY3 159 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 AQP10Q96PS8 301 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1D-17A0A075B6S4 117 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 A0A0A6YYD4 124 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1-12A0A0C4DH73 117 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 IGKV1D-12P01611 117 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 IGHV2-70DA0A0C4DH43 119 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 J3QLI3 93 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 PHOX2AO14813 284 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 MALP21145 153 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 C5orf64Q2M2E5 130 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 HIST1H2BAQ96A08 127 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 VAMP3Q15836 100 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 RARRES2Q99969 163 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 PROK2Q9HC23 129 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 GRNP28799 593 aaKnown RBP8.8□□□□□ -1
SYNPO2-201ENST00000307142 CENPWQ5EE01 88 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 C1orf122Q6ZSJ8 110 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 DTX2Q86UW9 622 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 TMEM218A2RU14 115 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 ACTL10Q5JWF8 245 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
SYNPO2-201ENST00000307142 E9PQ18 207 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 MIR17HGQ75NE6 70 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 OR11H4Q8NGC9 324 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 FMC1Q96HJ9 113 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 NDPQ00604 133 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 ZNF362Q5T0B9 420 aaPredicted RBP8.79□□□□□ -1
SYNPO2-201ENST00000307142 IGF2-ASQ6U949 168 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 LHFPL4Q7Z7J7 247 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 USMG5Q96IX5 58 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 SLC50A1Q9BRV3 221 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 CRPP02741 224 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 TDGF1P13385 188 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 ZNF660Q6AZW8 331 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms