RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
BRD3-201ENST00000303407 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 TMEM136Q6ZRR5 245 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 A0A1W2PRE2 83 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 A6NJY4 79 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 IGHG3P01860 377 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
BRD3-201ENST00000303407 TRAV5A0A0B4J249 113 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 GAFA1Q96PS6 74 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 MGST2Q99735 147 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 LINC00473A8K010 186 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 COLCA2A8K830 154 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BKO60814 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 SERF1AO75920 110 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BJP06899 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BOP23527 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BBP33778 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BDP58876 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BCP62807 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST2H2BEQ16778 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.5□□□□□ -0.25
BRD3-201ENST00000303407 NUP37Q8NFH4 326 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BHQ93079 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 RNF125Q96EQ8 232 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BNQ99877 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 HIST1H2BMQ99879 126 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 PMCHL2Q9BQD1 86 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 IGHV2-26A0A0B4J1V2 119 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 GAGE10A6NGK3 116 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 CTAG1AP78358 180 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 TRAV1-1A0A0B4J248 108 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 HAX1O00165 279 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 CXCL1P09341 107 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 TMEM14EPQ6UXP3 125 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 PROK2Q9HC23 129 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 Q9UFV3 132 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 ZNF257Q9Y2Q1 563 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 KIF26BQ2KJY2 2108 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 UBE2CO00762 179 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 ASIPP42127 132 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 TNFRSF14Q92956 283 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 C7orf69Q9H7B7 122 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 MBD3L4A6NDZ8 208 aaPredicted RBP13.49□□□□□ -0.25
BRD3-201ENST00000303407 MBD3L3A6NE82 208 aaPredicted RBP13.49□□□□□ -0.25
BRD3-201ENST00000303407 MBD3L5A6NJ08 208 aaPredicted RBP13.49□□□□□ -0.25
BRD3-201ENST00000303407 LHFPL4Q7Z7J7 247 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 GLRX5Q86SX6 157 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 MBD3L2Q8NHZ7 208 aaPredicted RBP13.49□□□□□ -0.25
BRD3-201ENST00000303407 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 ALPK2Q86TB3 2170 aa13.49□□□□□ -0.25
BRD3-201ENST00000303407 A0A1B0GW15 77 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 FABP2P12104 132 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 SSBP4Q9BWG4 385 aaPredicted RBP13.48□□□□□ -0.25
BRD3-201ENST00000303407 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 IGKV1D-17A0A075B6S4 117 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 M0R381 172 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
BRD3-201ENST00000303407 COLCA1Q6ZS62 124 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 FER1L6-AS1Q8NA97 138 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 C18orf15Q96N68 181 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 A0A0G2JRQ6 117 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 IGHV1-8P0DP01 117 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 Q6AWC8 147 aa13.48□□□□□ -0.25
BRD3-201ENST00000303407 STAG3L2P0CL84 134 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 STAG3L3P0CL85 134 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 LGALS3P17931 250 aaKnown RBP13.47□□□□□ -0.25
BRD3-201ENST00000303407 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 SMAD7O15105 426 aaKnown RBP13.47□□□□□ -0.25
BRD3-201ENST00000303407 LINC00205P59089 165 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 A1L4Q6 167 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 ZNF672Q499Z4 452 aaPredicted RBP13.47□□□□□ -0.25
BRD3-201ENST00000303407 C8orf46Q8TAG6 207 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 KIR2DL4Q99706 377 aa13.47□□□□□ -0.25
BRD3-201ENST00000303407 H7C2G1 150 aa13.46□□□□□ -0.25
BRD3-201ENST00000303407 RNASE4P34096 147 aaKnown RBP13.46□□□□□ -0.25
BRD3-201ENST00000303407 FBLL1A6NHQ2 334 aaKnown RBP13.46□□□□□ -0.25
BRD3-201ENST00000303407 IGHV3-11P01762 117 aa13.46□□□□□ -0.25
BRD3-201ENST00000303407 C14orf144Q96I85 54 aa13.46□□□□□ -0.25
BRD3-201ENST00000303407 MYOD1P15172 320 aa13.46□□□□□ -0.25
BRD3-201ENST00000303407 RPP25LQ8N5L8 163 aaKnown RBP13.46□□□□□ -0.25
BRD3-201ENST00000303407 TMEM160Q9NX00 188 aa13.46□□□□□ -0.25
BRD3-201ENST00000303407 HELZP42694 1942 aaKnown RBP13.46□□□□□ -0.26
BRD3-201ENST00000303407 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.26
BRD3-201ENST00000303407 C9JCJ5 164 aa13.46□□□□□ -0.26
BRD3-201ENST00000303407 SLC25A48Q6ZT89 311 aaKnown RBP13.46□□□□□ -0.26
BRD3-201ENST00000303407 LY6DQ14210 128 aa13.45□□□□□ -0.26
BRD3-201ENST00000303407 ANAPC10Q9UM13 185 aa13.45□□□□□ -0.26
BRD3-201ENST00000303407 FANCMQ8IYD8 2048 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms