RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 SFT2D1Q8WV19 159 aa9.99□□□□□ -0.81
SGCE-201ENST00000265735 SMDT1Q9H4I9 107 aa9.99□□□□□ -0.81
SGCE-201ENST00000265735 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 RRHO14718 337 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 MOSP00540 346 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 HNF4GQ14541 408 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 PRR31Q5SQ13 230 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 SPSB3Q6PJ21 355 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 KLHDC1Q8N7A1 406 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 OR1L8Q8NGR8 309 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 NPCDR1Q9BY65 106 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 RPRMQ9NS64 109 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 KIAA1456Q9P272 454 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 WDR83OSQ9Y284 106 aa9.98□□□□□ -0.81
SGCE-201ENST00000265735 A0A1W2PN81 502 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 PRSS46E5RG02 174 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 IGLV2-23P01705 113 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 ADCYAP1P18509 176 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 M6PRP20645 277 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 CHRNA7P36544 502 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
SGCE-201ENST00000265735 TET2Q6N021 2002 aaPredicted RBP9.97□□□□□ -0.81
SGCE-201ENST00000265735 A0A1B0GV50 99 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 SMCO3A2RU48 225 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 RBFOX3A6NFN3 312 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 FNDC10F2Z333 226 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 INS-IGF2F8WCM5 200 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 CA2P00918 260 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 MYOD1P15172 320 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.81
SGCE-201ENST00000265735 TMEM95Q3KNT9 176 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 Q8N9W7 124 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 TEX45Q8NA69 505 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 TMEM170AQ8WVE7 144 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 SCRT1Q9BWW7 348 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 NPVFQ9HCQ7 196 aa9.96□□□□□ -0.81
SGCE-201ENST00000265735 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
SGCE-201ENST00000265735 SNAPINO95295 136 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 ERHP84090 104 aaKnown RBP9.96□□□□□ -0.82
SGCE-201ENST00000265735 C2orf83Q53S99 150 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 MRPL41Q8IXM3 137 aaKnown RBP9.96□□□□□ -0.82
SGCE-201ENST00000265735 RCC1LQ96I51 464 aaKnown RBP9.96□□□□□ -0.82
SGCE-201ENST00000265735 RNF5Q99942 180 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
SGCE-201ENST00000265735 VSIRQ9H7M9 311 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 NDUFA4L2Q9NRX3 87 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 KCNIP2Q9NS61 270 aa9.96□□□□□ -0.82
SGCE-201ENST00000265735 SLC25A17O43808 307 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 IGHG2P01859 326 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OPN1MWP04001 364 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OPN1MW2P0DN77 364 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OPN1MW3P0DN78 364 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 PPT1P50897 306 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 CCL20P78556 96 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 ACOT6Q3I5F7 207 aaPredicted RBP9.95□□□□□ -0.82
SGCE-201ENST00000265735 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 SLC39A9Q9NUM3 307 aa9.95□□□□□ -0.82
SGCE-201ENST00000265735 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SGCE-201ENST00000265735 C9JQL5 133 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 MAS1LP35410 378 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 OPRK1P41145 380 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 RAB31Q13636 194 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 BSXQ3C1V8 233 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
SGCE-201ENST00000265735 ZNF506Q5JVG8 444 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 ACSM6Q6P461 480 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 LCN15Q6UWW0 184 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 SUN5Q8TC36 379 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 RITA1Q96K30 269 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 ACTR3CQ9C0K3 210 aaPredicted RBP9.94□□□□□ -0.82
SGCE-201ENST00000265735 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
SGCE-201ENST00000265735 ZNF430Q9H8G1 570 aaPredicted RBP9.94□□□□□ -0.82
SGCE-201ENST00000265735 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 MAP1LC3B2A6NCE7 125 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 CYB5BO43169 146 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 IFNA1P01562 189 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
SGCE-201ENST00000265735 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 ZNF726P1Q15940 193 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 RPP25LQ8N5L8 163 aaKnown RBP9.93□□□□□ -0.82
SGCE-201ENST00000265735 MAP1LC3BQ9GZQ8 125 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 M0QZ24 198 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 ACTL6BO94805 426 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 NDUFA3O95167 84 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
SGCE-201ENST00000265735 CD28P10747 220 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 PSG5Q15238 335 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 HAGHQ16775 308 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 C9orf152Q5JTZ5 239 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 ATRAIDQ6UW56 229 aa9.93□□□□□ -0.82
SGCE-201ENST00000265735 NPBQ8NG41 125 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms