RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RAMP3O60896 148 aa11.46□□□□□ -0.57
CDH1-201ENST00000261769 K7EM74 188 aa11.46□□□□□ -0.57
CDH1-201ENST00000261769 USMG5Q96IX5 58 aa11.46□□□□□ -0.57
CDH1-201ENST00000261769 AREGP15514 252 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.58
CDH1-201ENST00000261769 LINC01587Q99440 93 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 PAX1P15863 534 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 LEMD1Q68G75 181 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 COQ2Q96H96 371 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 VAMP8Q9BV40 100 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 PLXNA2O75051 1894 aa11.46□□□□□ -0.58
CDH1-201ENST00000261769 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 MAP1LC3CQ9BXW4 147 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 GCSHP23434 173 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 CCKARP32238 428 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 ZNF56Q15929 161 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 TOMM20LQ6UXN7 152 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 LTBP2Q14767 1821 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 TMEM250H0YL14 139 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 SAP30O75446 220 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 ASIPP42127 132 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 C15orf32Q32M92 178 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 NOTCH3Q9UM47 2321 aa11.45□□□□□ -0.58
CDH1-201ENST00000261769 CD55P08174 381 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 ELOBQ15370 118 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 RCC1LQ96I51 464 aaKnown RBP11.44□□□□□ -0.58
CDH1-201ENST00000261769 DKK4Q9UBT3 224 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 IGLV3-9A0A075B6K5 115 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 LDLRAD4O15165 306 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 IGKV1D-8A0A087WSZ0 117 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 PLAURQ03405 335 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 GFI1Q99684 422 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 DOCK10Q96BY6 2186 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 LINC00862A6NCI5 91 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 BEND2Q8NDZ0 799 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 SPRY4Q9C004 299 aa11.44□□□□□ -0.58
CDH1-201ENST00000261769 ITGB1BP1O14713 200 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 PRB1P04280 392 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 MBNL3Q9NUK0 354 aaKnown RBP11.43□□□□□ -0.58
CDH1-201ENST00000261769 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 CBY3A6NI87 242 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 C9JCJ5 164 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 H0YJW9 148 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 DLX1P56177 255 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 CD81P60033 236 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 FHL1Q13642 323 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 ZNF585BQ52M93 769 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 ID3Q02535 119 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 TFF3Q07654 80 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 SGK494Q96LW2 274 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 FAM3BP58499 235 aaPredicted RBP11.43□□□□□ -0.58
CDH1-201ENST00000261769 PMS2P11Q13670 270 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
CDH1-201ENST00000261769 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
CDH1-201ENST00000261769 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 LRTM2Q8N967 370 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 SDHCQ99643 169 aaPredicted RBP11.42□□□□□ -0.58
CDH1-201ENST00000261769 LEPP41159 167 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 RNF166Q96A37 237 aaPredicted RBP11.42□□□□□ -0.58
CDH1-201ENST00000261769 KCNS1Q96KK3 526 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 TRGV2A0A075B6R0 118 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 TRBV7-1A0A0A6YYK4 115 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 NMBP08949 121 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 CD33P20138 364 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 Q6ZS49 121 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 MAP1LC3AQ9H492 121 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 PGLYRP4Q96LB8 373 aa11.42□□□□□ -0.58
CDH1-201ENST00000261769 PPP1R17O96001 155 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 KLHL30-AS1Q8NEE0 82 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 PEX7O00628 323 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 CGAP01215 116 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 CFHR2P36980 270 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 SDF2L1Q9HCN8 221 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 OTORQ9NRC9 128 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 GATA2P23769 480 aaPredicted RBP11.41□□□□□ -0.58
CDH1-201ENST00000261769 CIARTQ8N365 385 aaPredicted RBP11.41□□□□□ -0.58
CDH1-201ENST00000261769 PACRGQ96M98 296 aaPredicted RBP11.41□□□□□ -0.58
CDH1-201ENST00000261769 IFT22Q9H7X7 185 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 NCOR2Q9Y618 2525 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 PHOX2AO14813 284 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 LMO1P25800 156 aa11.41□□□□□ -0.58
CDH1-201ENST00000261769 GSX1Q9H4S2 264 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms