RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 POLR2GP62487 172 aaKnown RBP eCLIP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 MOGAT3Q86VF5 341 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 IL22RA2Q969J5 263 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 UQCC1Q9NVA1 299 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 ARPC5O15511 151 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 GAPDHP04406 335 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 GIG44P09565 113 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 PSMB6P28072 239 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 MYCNOSP40205 109 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OPCMLQ14982 345 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 KHDC1LQ5JSQ8 128 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 SELENOHQ8IZQ5 122 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10A7Q8NGE5 316 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OR2G3Q8NGZ4 309 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 DYNLRB2Q8TF09 96 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 FRZBQ92765 325 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 TVP23CQ96ET8 276 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF2Q9BSG1 426 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM14BQ9NUH8 114 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 A0A1B0GU03 582 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 SEC14L6B5MCN3 397 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 FGF16O43320 207 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OR13C7P0DN81 318 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 MAS1LP35410 378 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 RIGQ13278 110 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 LRRC37A5PQ49AS3 106 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OR8U1Q8NH10 309 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5B3Q8NH48 314 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM222Q9H0R3 208 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 PPYP01298 95 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 CRYGCP07315 174 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5M8Q8NGP6 311 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 MRGPRDQ8TDS7 321 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 IGHV3-43A0A0B4J1X8 118 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 HELTA6NFD8 242 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 BCL2L11O43521 198 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PDE6DO43924 150 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 IGHV3-43DP0DP04 118 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 HKR1P10072 659 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 ADMP35318 185 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 P2RX3P56373 397 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 NHLH2Q02577 135 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 EDDM3AQ14507 147 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 AVPI1Q5T686 147 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 RBPMS2Q6ZRY4 209 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10J6PQ8NGY7 276 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM167A-AS1Q96KT0 104 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 CTDSP1Q9GZU7 261 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SAP30LQ9HAJ7 183 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 Q9UF83 564 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PSG11Q9UQ72 335 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PPIAL4EA0A075B759 164 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SERTM2A0A1B0GWG4 89 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM24AA6NFZ4 105 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 LEUTXA8MZ59 168 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PPP5D1E7EU14 171 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PPIAL4DF5H284 164 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SIRPB1O00241 398 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PPIAL4FP0DN26 164 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF429Q86V71 674 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10G8Q8NGN5 311 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 LRRC29Q8WV35 223 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 RDH5Q92781 318 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 PPIAL4AQ9Y536 164 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 MGST3O14880 152 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5AC1P0C628 307 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 LRRC75BQ2VPJ9 315 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 RFESDQ8TAC1 157 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 SNX22Q96L94 193 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 NMES1Q9C002 83 aa4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 GSX1Q9H4S2 264 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF705FA8MVS1 300 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HBZP02008 142 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HOXB5P09067 269 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF705DP0CH99 300 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF705BP0CI00 300 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TPPP2P59282 170 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM106AQ4KMX7 169 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 CENPVQ7Z7K6 275 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 OR2Z1Q8NG97 314 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 CLDND2Q8NHS1 167 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 RPUSD1Q9UJJ7 312 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 TEX50A0A1B0GTY4 177 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 NPIPB6E9PJ23 425 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 HS3ST1O14792 307 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SFT2D2O95562 160 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 CLINT1Q14677 625 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 SLC35E4Q6ICL7 350 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 EBLN2Q6P2I7 272 aa4.36□□□□□ -1.71
TOPBP1-201ENST00000260810 ERASQ7Z444 233 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms