RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
CCDC47-201ENST00000225726 TMEM11P17152 192 aa11.86□□□□□ -0.51
CCDC47-201ENST00000225726 BRS3P32247 399 aa11.86□□□□□ -0.51
CCDC47-201ENST00000225726 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
CCDC47-201ENST00000225726 CNIH1O95406 144 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-201ENST00000225726 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 HAGHQ16775 308 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 OR1P1Q8NH06 330 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 SSMEM1Q8WWF3 244 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-201ENST00000225726 MLANAQ16655 118 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 FAM24BQ8N5W8 94 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 RAB24Q969Q5 203 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 SLC35B3Q9H1N7 401 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 SLC45A2Q9UMX9 530 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 URGCP-MRPS24S4R325 110 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 ICAM4Q14773 271 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
CCDC47-201ENST00000225726 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
CCDC47-201ENST00000225726 KMT2BQ9UMN6 2715 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-201ENST00000225726 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 IFNA1P01562 189 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PRR20EP86478 221 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PRR20CP86479 221 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PRR20DP86480 221 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PRR20BP86481 221 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PRR20AP86496 221 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 PYY3Q5JQD4 70 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-201ENST00000225726 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 B4DSR2 109 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 J3QKU1 62 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 CORTO00230 105 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 GCSAMLQ5JQS6 135 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 OR2T6Q8NHC8 308 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-201ENST00000225726 MFAP2P55001 183 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 KRTAP10-9P60411 292 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-201ENST00000225726 FXYD3Q14802 87 aa11.84□□□□□ -0.51
CCDC47-201ENST00000225726 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 NCBP2LA6PVI3 153 aaKnown RBP11.83□□□□□ -0.52
CCDC47-201ENST00000225726 HSPB1P04792 205 aaKnown RBP11.83□□□□□ -0.52
CCDC47-201ENST00000225726 BCL2P10415 239 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 OR10J1P30954 320 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 ABHD5Q8WTS1 349 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 ACY3Q96HD9 319 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 C1RLQ9NZP8 487 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 A0A1W2PPV4 95 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 LINC00869P0C866 280 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 APELAP0DMC3 54 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 TAS2R60P59551 318 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 RNF212Q495C1 297 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
CCDC47-201ENST00000225726 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
CCDC47-201ENST00000225726 A0A096LNT2 108 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 CRYGCP07315 174 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 TMEM249Q2WGJ8 235 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 ZNF562Q6V9R5 426 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 ZFP92A6NM28 416 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 HMGB3O15347 200 aaKnown RBP11.82□□□□□ -0.52
CCDC47-201ENST00000225726 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
CCDC47-201ENST00000225726 GATA3P23771 443 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 COTL1Q14019 142 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
CCDC47-201ENST00000225726 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
CCDC47-201ENST00000225726 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
CCDC47-201ENST00000225726 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 DEFA4P12838 97 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 C19orf35Q6ZS72 473 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 ARPC1AQ92747 370 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 TACC2O95359 2948 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
CCDC47-201ENST00000225726 RHOBP62745 196 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 Q8N9W7 124 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 C7orf69Q9H7B7 122 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
CCDC47-201ENST00000225726 PLXNB1O43157 2135 aa11.8□□□□□ -0.52
CCDC47-201ENST00000225726 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
CCDC47-201ENST00000225726 CX3CL1P78423 397 aa11.8□□□□□ -0.52
CCDC47-201ENST00000225726 LINC01356Q8N9X3 169 aa11.8□□□□□ -0.52
CCDC47-201ENST00000225726 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
CCDC47-201ENST00000225726 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms