RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 OR8B3Q8NGG8 313 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 Q8TCH9 128 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF391Q9UJN7 358 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 DMXL1Q9Y485 3027 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 YLPM1P49750 1951 aaKnown RBP11.34□□□□□ -0.59
SCARB2-227ENST00000640957 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A26D6RGX4 464 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 CLDN18P56856 261 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 NANOS1Q8WY41 292 aaKnown RBP11.34□□□□□ -0.59
SCARB2-227ENST00000640957 POM121L2Q96KW2 1035 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 ABI3Q9P2A4 366 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 IGHV1-69-2A0A0G2JMI3 117 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 KLK10O43240 276 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 FXYD7P58549 80 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 GNG5P63218 68 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 PROP1O75360 226 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 AMY1AP04745 511 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 PYYP10082 97 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 TM4SF20Q53R12 229 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 C1orf185Q5T7R7 199 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 MRPL52Q86TS9 123 aaKnown RBP11.33□□□□□ -0.6
SCARB2-227ENST00000640957 CHRDL1Q9BU40 450 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
SCARB2-227ENST00000640957 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM45BQ96B21 275 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
SCARB2-227ENST00000640957 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 LYZL6O75951 148 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 GPR12P47775 334 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 CD46P15529 392 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 RHOBP62745 196 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 ABCA4P78363 2273 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 ADGRG4Q8IZF6 3080 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 MUC15Q8N387 334 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 IL19Q9UHD0 177 aa11.32□□□□□ -0.6
SCARB2-227ENST00000640957 J3QT63 122 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 OPRK1P41145 380 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 MDP1Q86V88 176 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
SCARB2-227ENST00000640957 TRAV30A0A087WSZ9 112 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 GFRA3O60609 400 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 COQ2Q96H96 371 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 SPTBN1Q01082 2364 aaKnown RBP11.31□□□□□ -0.6
SCARB2-227ENST00000640957 P0C879 139 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
SCARB2-227ENST00000640957 KLF13Q9Y2Y9 288 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-227ENST00000640957 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 IGHV3OR15-7A0A075B7D8 119 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 FABP6P51161 128 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCARB2-227ENST00000640957 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 BVES-AS1Q5T3Y7 98 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 CACNA1BQ00975 2339 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 HIGD1CA8MV81 97 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 TNFSF15O95150 251 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 APELAP0DMC3 54 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 C1orf229Q6ZS94 237 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-227ENST00000640957 NUP35Q8NFH5 326 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
SCARB2-227ENST00000640957 TRGV10A0A0A0MS01 117 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM30CPA0ZSE6 113 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM251Q8N6I4 163 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 TTTY12Q9BZ98 90 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM140Q9NV12 185 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 MMP23AO75900 390 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
SCARB2-227ENST00000640957 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 SH2D2AQ9NP31 389 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 K7EMI3 77 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 GNG7O60262 68 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 AGFG2O95081 481 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 CCL11P51671 97 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-227ENST00000640957 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
SCARB2-227ENST00000640957 H0YJW9 148 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 LINC00869P0C866 280 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 ZNF134P52741 427 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms