RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DLX1P56177 255 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 DIAPH2-AS1Q14236 149 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
SCARB2-221ENST00000640341 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-221ENST00000640341 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 A6NNC1 897 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 SSBP2P81877 361 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-221ENST00000640341 FAM19A2Q8N3H0 131 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 SIGLECL1Q8N7X8 197 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 TECRQ9NZ01 308 aaKnown RBP11.92□□□□□ -0.5
SCARB2-221ENST00000640341 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 PTPRBP23467 1997 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 TRGV8A0A0C4DH27 118 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 E7EUB6 86 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 H3BTX0 84 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 ZNF253O75346 499 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 TMPRSS3P57727 454 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 ENSAO43768 121 aaKnown RBP11.91□□□□□ -0.5
SCARB2-221ENST00000640341 PRR20EP86478 221 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 PRR20CP86479 221 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 PRR20DP86480 221 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 PRR20BP86481 221 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 PRR20AP86496 221 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 GNB4Q9HAV0 340 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 IBA57Q5T440 356 aaKnown RBP11.91□□□□□ -0.5
SCARB2-221ENST00000640341 STUMQ69YW2 141 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 V9GYV3 84 aa11.91□□□□□ -0.5
SCARB2-221ENST00000640341 K7EM74 188 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 M0R143 59 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 SRIP30626 198 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 LGALS4P56470 323 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 LINC00310P59036 64 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 OR10X1Q8NGY0 326 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 UPK2O00526 184 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 TNFSF4P23510 183 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 YPEL3P61236 119 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-221ENST00000640341 CORO2AQ92828 525 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 LOXL4Q96JB6 756 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 VAMP8Q9BV40 100 aa11.9□□□□□ -0.5
SCARB2-221ENST00000640341 TOX4O94842 621 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 C1orf194Q5T5A4 169 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 C19orf35Q6ZS72 473 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 FAM168AQ92567 244 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 RNF114Q9Y508 228 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 LHBP01229 141 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-221ENST00000640341 ORM2P19652 201 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 AARDQ4LEZ3 155 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 HCP5Q6MZN7 132 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-221ENST00000640341 CAMPP49913 170 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 TAS2R45P59539 299 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 NUTF2P61970 127 aaKnown RBP11.89□□□□□ -0.51
SCARB2-221ENST00000640341 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
SCARB2-221ENST00000640341 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
SCARB2-221ENST00000640341 COX7A2P2O60397 106 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 CGB3P0DN86 165 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 CGB7P0DN87 165 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 TBL2Q9Y4P3 447 aaKnown RBP11.88□□□□□ -0.51
SCARB2-221ENST00000640341 APOA2P02652 100 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 AREGP15514 252 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 GNG5P63218 68 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 TMEM249Q2WGJ8 235 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 WNT10AQ9GZT5 417 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 hADV38S2A0JD32 116 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 MOSP00540 346 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
SCARB2-221ENST00000640341 BEND2Q8NDZ0 799 aa11.88□□□□□ -0.51
SCARB2-221ENST00000640341 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
SCARB2-221ENST00000640341 C8orf88P0DMB2 117 aa11.87□□□□□ -0.51
SCARB2-221ENST00000640341 RBMXL3Q8N7X1 1067 aaKnown RBP11.87□□□□□ -0.51
SCARB2-221ENST00000640341 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
SCARB2-221ENST00000640341 CD40P25942 277 aa11.87□□□□□ -0.51
SCARB2-221ENST00000640341 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-221ENST00000640341 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
SCARB2-221ENST00000640341 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
SCARB2-221ENST00000640341 TMEM68Q96MH6 324 aa11.87□□□□□ -0.51
SCARB2-221ENST00000640341 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-221ENST00000640341 FBXL7Q9UJT9 491 aa11.87□□□□□ -0.51
SCARB2-221ENST00000640341 DYSFO75923 2080 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms