RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 SPINT1O43278 529 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 FHL5Q5TD97 284 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 DUSP14O95147 198 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 SSBP3Q9BWW4 388 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 Q6ZT83 130 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 PLA2G2FQ9BZM2 168 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 PTPRQQ9UMZ3 2332 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 GAGE2BQ13066 116 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 GAGE2EQ4V326 116 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 GAGE2DQ9UEU5 116 aa15.33■□□□□ 0.04
CACNA1A-247ENST00000637769 FABP5P3A8MUU1 101 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 CCL4P13236 92 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 RNASE4P34096 147 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 ATP5L2Q7Z4Y8 100 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 ORAOV1Q8WV07 137 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 GNB1LQ9BYB4 327 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 JPT2Q9H910 190 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 CELA2BP08218 269 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 CARHSP1Q9Y2V2 147 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 TMEM187Q14656 261 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 YBX2Q9Y2T7 364 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 IGHV4-39P01824 125 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 MDKP21741 143 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 GAGE13Q4V321 117 aa15.32■□□□□ 0.04
CACNA1A-247ENST00000637769 F8WEM9 126 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 STHQ8IWL8 128 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 OTORQ9NRC9 128 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 TRGV11A0A075B6L2 103 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 A0A0J9YW62 118 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 HRKO00198 91 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 LIMS2Q7Z4I7 341 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 A0A1W2PPV9 198 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 NAV3Q8IVL0 2385 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 TRBV5-7A0A0A0MS05 114 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 POC1AQ8NBT0 407 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 SMRP1Q8NCR6 262 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 MRPL20Q9BYC9 149 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 COL18A1P39060 1754 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 TPRX1Q8N7U7 411 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 LHFPL6Q9Y693 200 aa15.31■□□□□ 0.04
CACNA1A-247ENST00000637769 TRAV12-3A0A0B4J271 114 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 SLC25A38Q96DW6 304 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 OR9G4Q8NGQ1 327 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 LAMTOR2Q9Y2Q5 125 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 CD200R1LQ6Q8B3 271 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 HAPLN4Q86UW8 402 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 OR5P3Q8WZ94 311 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 IFI27L2Q9H2X8 130 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 KLHDC2Q9Y2U9 406 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 OTOGLQ3ZCN5 2332 aa15.3■□□□□ 0.04
CACNA1A-247ENST00000637769 LINC00614P0C842 121 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 FAM89BQ8N5H3 189 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 OPN3Q9H1Y3 402 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 Q9H3A6 140 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 C5orf67F2Z3F1 127 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 MOSP00540 346 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 H2BFSP57053 126 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 PVRIGQ6DKI7 326 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 FAM90A9PA6NNJ1 464 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 LDLRAD2Q5SZI1 272 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 RASL11AQ6T310 242 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 DRAM1Q8N682 238 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 AGRNO00468 2067 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 HSD52Q0P140 79 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 LILRA1O75019 489 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 IL11P20809 199 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 C1QTNF12Q5T7M4 302 aa15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 ZNF501Q96CX3 271 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-247ENST00000637769 IGKV3-20P01619 116 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 SNRPCP09234 159 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 PNKDQ8N490 385 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 FBLIM1Q8WUP2 373 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 CD7P09564 240 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 SNAI3Q3KNW1 292 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 SAA1P0DJI8 122 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 EFNB1P98172 346 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 LY6EQ16553 131 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 GLI3P10071 1580 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 TRAV9-2A0A087WT02 112 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 FBXL7Q9UJT9 491 aa15.28■□□□□ 0.04
CACNA1A-247ENST00000637769 COL9A1P20849 921 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 FOXA3P55318 350 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 VKORC1Q9BQB6 163 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 ERG28Q9UKR5 140 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 FOXA2Q9Y261 457 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 ZSWIM8A7E2V4 1837 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 SONP18583 2426 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 TOMM40O96008 361 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 FAM168AQ92567 244 aa15.27■□□□□ 0.04
CACNA1A-247ENST00000637769 C2orf16Q68DN1 1984 aa15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 ACP7Q6ZNF0 438 aa15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 IFITM2Q01629 132 aa15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 ZNF703Q9H7S9 590 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 SPANXCQ9NY87 97 aa15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 LAGE3Q14657 143 aa15.27■□□□□ 0.03
CACNA1A-247ENST00000637769 WBP1LQ9NX94 342 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms