RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
NEK3-210ENST00000620675 KLK9Q2XQG4 91 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 MED28Q9H204 178 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
NEK3-210ENST00000620675 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
NEK3-210ENST00000620675 KLK9Q9UKQ9 250 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 LRRC37A5PQ49AS3 106 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 NECAP1Q8NC96 275 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 SLC24A4Q8NFF2 622 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 PINX1Q96BK5 328 aaKnown RBP10.54□□□□□ -0.72
NEK3-210ENST00000620675 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 NUDT19A8MXV4 375 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 CCNKO75909 580 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 IFNA10P01566 189 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 S100A10P60903 97 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
NEK3-210ENST00000620675 PVRIGQ6DKI7 326 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 Q6ZNX1 250 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 HIPK2Q9H2X6 1198 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 H0YIZ8 118 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 I3L2K1 104 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 NPY1RP25929 384 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 EXOSC2Q13868 293 aaKnown RBP10.53□□□□□ -0.72
NEK3-210ENST00000620675 SPANXN5Q5MJ07 72 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 ZFP57Q9NU63 452 aa10.53□□□□□ -0.72
NEK3-210ENST00000620675 F8W735 103 aaPredicted RBP10.52□□□□□ -0.73
NEK3-210ENST00000620675 MT-CO2P00403 227 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 HTR2BP41595 481 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 PPP1R1CQ8WVI7 109 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.73
NEK3-210ENST00000620675 PAIP2BQ9ULR5 123 aaKnown RBP10.52□□□□□ -0.73
NEK3-210ENST00000620675 hCG_2014768A0A024R1R8 64 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 A0A087WW49 117 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 FAM223BA6NKX1 122 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 MED6O75586 246 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 LGALS1P09382 135 aaKnown RBP10.51□□□□□ -0.73
NEK3-210ENST00000620675 Q5BKY6 102 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 ZNF343Q6P1L6 599 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 FAM223AQ8IWN6 122 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 NMES1Q9C002 83 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 OR5AC2Q9NZP5 309 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
NEK3-210ENST00000620675 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
NEK3-210ENST00000620675 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 ZNF502Q8TBZ5 544 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 USMG5Q96IX5 58 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 PSENENQ9NZ42 101 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 U3KQ87 197 aa10.51□□□□□ -0.73
NEK3-210ENST00000620675 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
NEK3-210ENST00000620675 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
NEK3-210ENST00000620675 CACFD1Q9UGQ2 172 aa10.5□□□□□ -0.73
NEK3-210ENST00000620675 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 BMPR1BO00238 502 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 OPRK1P41145 380 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 SLURP1P55000 103 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 HAPLN4Q86UW8 402 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 UBAC2Q8NBM4 344 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 RNF126Q9BV68 326 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 ZNF436Q9C0F3 470 aaPredicted RBP10.49□□□□□ -0.73
NEK3-210ENST00000620675 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 PRSS46E5RG02 174 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 CCL24O00175 119 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 DEDDO75618 318 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 IFNA4P05014 189 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 GPR183P32249 361 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.73
NEK3-210ENST00000620675 RUNX1Q01196 453 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 ZNF414Q96IQ9 312 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
NEK3-210ENST00000620675 RAB40CQ96S21 281 aa10.49□□□□□ -0.73
NEK3-210ENST00000620675 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
NEK3-210ENST00000620675 MPC2O95563 127 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 CLEC3BP05452 202 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 EEF1AKMT3Q96AZ1 226 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 CHRDL1Q9BU40 450 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms