RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 DYNC2LI1Q8TCX1 351 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 UBQLN2Q9UHD9 624 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 CSMD3Q7Z407 3707 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 K7EMT4 169 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 TSPAN4O14817 238 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 NUPL2O15504 423 aaKnown RBP12.79□□□□□ -0.36
HMGN3-203ENST00000620514 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
HMGN3-203ENST00000620514 UCP1P25874 307 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 MRPS10P82664 201 aaKnown RBP12.79□□□□□ -0.36
HMGN3-203ENST00000620514 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 RAB2BQ8WUD1 216 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 SMIM4Q8WVI0 70 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 DIRAS2Q96HU8 199 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
HMGN3-203ENST00000620514 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
HMGN3-203ENST00000620514 CCDC59Q9P031 241 aaKnown RBP12.79□□□□□ -0.36
HMGN3-203ENST00000620514 IGHV3-49A0A0A0MS15 119 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 YIF1AO95070 293 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 IFNA17P01571 189 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-203ENST00000620514 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
HMGN3-203ENST00000620514 RELQ04864 619 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-203ENST00000620514 IL18Q14116 193 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 TXN2Q99757 166 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 RTBDNQ9BSG5 229 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-203ENST00000620514 NXF2Q9GZY0 626 aaKnown RBP12.78□□□□□ -0.36
HMGN3-203ENST00000620514 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
HMGN3-203ENST00000620514 LOC102724200A0A096LPH7 203 aaPredicted RBP12.77□□□□□ -0.37
HMGN3-203ENST00000620514 ATG12O94817 140 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 OR5AC1P0C628 307 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 ETV6P41212 452 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 TMBIM6P55061 237 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 MEF2DQ14814 521 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 LAMTOR1Q6IAA8 161 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 Q6ZRM9 215 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 LHFPL5Q8TAF8 219 aa12.77□□□□□ -0.37
HMGN3-203ENST00000620514 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 CHEK1O14757 476 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 CTDSPLO15194 276 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 GNG7O60262 68 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
HMGN3-203ENST00000620514 SNCAP37840 140 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 ODF3L2Q3SX64 289 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 RNASE11Q8TAA1 199 aaKnown RBP12.76□□□□□ -0.37
HMGN3-203ENST00000620514 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
HMGN3-203ENST00000620514 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 RNF2Q99496 336 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 PDCD10Q9BUL8 212 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 RHPN1-AS1Q9BWJ2 59 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
HMGN3-203ENST00000620514 NAA60Q9H7X0 242 aa12.76□□□□□ -0.37
HMGN3-203ENST00000620514 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
HMGN3-203ENST00000620514 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-203ENST00000620514 HOXA1P49639 335 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-203ENST00000620514 PVRIGQ6DKI7 326 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 GLYATL2Q8WU03 294 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 BCL7BQ9BQE9 202 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 OVOL2Q9BRP0 275 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 TMEM222Q9H0R3 208 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
HMGN3-203ENST00000620514 LCE6AA0A183 80 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 H3BMQ9 156 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 CDS2O95674 445 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 RPL5P46777 297 aaKnown RBP12.74□□□□□ -0.37
HMGN3-203ENST00000620514 MLANAQ16655 118 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
HMGN3-203ENST00000620514 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
HMGN3-203ENST00000620514 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
HMGN3-203ENST00000620514 MRPL36Q9P0J6 103 aaKnown RBP12.74□□□□□ -0.37
HMGN3-203ENST00000620514 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 TRAV14DV4A0A0A6YYC5 116 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 ANKRD20A5PA0PJZ0 165 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 OR4C46A6NHA9 309 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 GSTZ1O43708 216 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-203ENST00000620514 NPBWR1P48145 328 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 TFPI2P48307 235 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 SURF2Q15527 256 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-203ENST00000620514 GPR146Q96CH1 333 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 FNDC4Q9H6D8 234 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-203ENST00000620514 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 RABL2AQ9UBK7 228 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-203ENST00000620514 RABL2BQ9UNT1 228 aa12.73□□□□□ -0.37
HMGN3-203ENST00000620514 CRYM-AS1A6NIL9 109 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 TMEM50AO95807 157 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 APOHP02749 345 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-203ENST00000620514 TNFSF8P32971 234 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 SUB1P53999 127 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMGN3-203ENST00000620514 RBPMSQ93062 196 aaKnown RBP12.72□□□□□ -0.37
HMGN3-203ENST00000620514 TMEM230Q96A57 120 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms