RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CD5P06127 495 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HTN1P15515 57 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TIMP3P35625 211 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR4C13Q8NGP0 309 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IFI27L2Q9H2X8 130 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TIMM9Q9Y5J7 89 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 GNLYP22749 145 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TREML4Q6UXN2 200 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 A0A1W2PN81 502 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 FCGR2BP31994 310 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 DSCAMO60469 2012 aa12.15□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF729A6NN14 1252 aaPredicted RBP12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CTRB1P17538 263 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CTRB2Q6GPI1 263 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TMEM219Q86XT9 240 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 BTF3L4Q96K17 158 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 WASHC3Q9Y3C0 194 aa12.15□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TFPI2P48307 235 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CNN1P51911 297 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 IGFL4Q6B9Z1 124 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RASL11BQ9BPW5 248 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 AREGP15514 252 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 DEFB104AQ8WTQ1 72 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CORO2AQ92828 525 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 C5orf30Q96GV9 206 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 HSPB7Q9UBY9 170 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 NAGKQ9UJ70 344 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 C15orf62A8K5M9 175 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 BPIFB3P59826 476 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 KLRB1Q12918 225 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 BRD3OSQ6XYD6 125 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PAXXQ9BUH6 204 aa12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-206ENST00000617039 COLCA2A8K830 154 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 OR2J3O76001 311 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 FABP1P07148 127 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 DEFA6Q01524 100 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PAX5Q02548 391 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 MBNL2Q5VZF2 373 aaKnown RBP12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 YPEL1O60688 119 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ACAA1P09110 424 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RAB4AP20338 218 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 HTR1DP28221 377 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 YPEL2Q96QA6 119 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RPUSD1Q9UJJ7 312 aaKnown RBP12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TIMM23O14925 209 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CXorf1O96002 111 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PRB1P04280 392 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CCKARP32238 428 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 MFAP2P55001 183 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 KCNIP2Q9NS61 270 aa12.13□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ATOH7Q8N100 152 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 GCHFRP30047 84 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PPOXP50336 477 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 LOC105371242A0A075B767 164 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 AMY1AP04745 511 aa12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11A-206ENST00000617039 FLNCQ14315 2725 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 J3QW42 95 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 NRGNQ92686 78 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RBM14Q96PK6 669 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 B9A039 149 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 IGHV3-11P01762 117 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RNASEKQ6P5S7 137 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 MGST2Q99735 147 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 CLEC7AQ9BXN2 247 aa12.11□□□□□ -0.47
TNFRSF11A-206ENST00000617039 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
TNFRSF11A-206ENST00000617039 ZNF253O75346 499 aa12.1□□□□□ -0.47
TNFRSF11A-206ENST00000617039 RPL23P62829 140 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms