RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ANAPC10Q9UM13 185 aa13.1□□□□□ -0.31
SMN2-213ENST00000614240 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 NAT1P18440 290 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 PRCDQ00LT1 54 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 TMEM187Q14656 261 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 FAM90A2PQ658T7 463 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 DUSP18Q8NEJ0 188 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 KRTAP17-1Q9BYP8 105 aa13.09□□□□□ -0.31
SMN2-213ENST00000614240 ATP6V1G2O95670 118 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 TGFBR1P36897 503 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 NPBWR1P48145 328 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 DEFB131AP59861 70 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 ZNF114Q8NC26 417 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 ST8SIA2Q92186 375 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 ZNF414Q96IQ9 312 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 SEC22AQ96IW7 307 aa13.08□□□□□ -0.32
SMN2-213ENST00000614240 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
SMN2-213ENST00000614240 IGHV3-66A0A0C4DH42 116 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 DFFBO76075 338 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 SNCAP37840 140 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
SMN2-213ENST00000614240 HSPE1P61604 102 aaKnown RBP13.07□□□□□ -0.32
SMN2-213ENST00000614240 SPINK9Q5DT21 86 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 MS4A6AQ9H2W1 248 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
SMN2-213ENST00000614240 SMIM31A0A1B0GVY4 71 aa13.06□□□□□ -0.32
SMN2-213ENST00000614240 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
SMN2-213ENST00000614240 ZNF600Q6ZNG1 722 aa13.06□□□□□ -0.32
SMN2-213ENST00000614240 STHQ8IWL8 128 aa13.06□□□□□ -0.32
SMN2-213ENST00000614240 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
SMN2-213ENST00000614240 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMN2-213ENST00000614240 IGLL5B9A064 214 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
SMN2-213ENST00000614240 TCTAP57738 103 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 CENPSQ8N2Z9 138 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 LILRB2Q8N423 598 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 SLC35G3Q8N808 338 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
SMN2-213ENST00000614240 IGKV1-39P01597 117 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 IGKV1D-39P04432 117 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 NPPCP23582 126 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PRR20EP86478 221 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PRR20CP86479 221 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PRR20DP86480 221 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PRR20BP86481 221 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PRR20AP86496 221 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 GPX8Q8TED1 209 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 PDCD10Q9BUL8 212 aa13.04□□□□□ -0.32
SMN2-213ENST00000614240 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 A0A1W2PS18 150 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 C11orf94C9JXX5 98 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 TMEM50AO95807 157 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 IFNA17P01571 189 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 PGAM2P15259 253 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 SUB1P53999 127 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMN2-213ENST00000614240 UCP3P55916 312 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 IZUMO4Q1ZYL8 232 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 KCTD21Q4G0X4 260 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 SCPEP1Q9HB40 452 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 COMMD3Q9UBI1 195 aa13.03□□□□□ -0.32
SMN2-213ENST00000614240 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 RCVRNP35243 200 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 AKR1C2P52895 323 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.33
SMN2-213ENST00000614240 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 ENY2Q9NPA8 101 aa13.02□□□□□ -0.33
SMN2-213ENST00000614240 PLECQ15149 4684 aaKnown RBP13.02□□□□□ -0.33
SMN2-213ENST00000614240 A0A1B0GU03 582 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 CORTO00230 105 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 ATG12O94817 140 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 HOXA1P49639 335 aaPredicted RBP13.01□□□□□ -0.33
SMN2-213ENST00000614240 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 TMEM230Q96A57 120 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 METTL26Q96S19 204 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
SMN2-213ENST00000614240 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
SMN2-213ENST00000614240 M0QYG6 137 aa13□□□□□ -0.33
SMN2-213ENST00000614240 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
SMN2-213ENST00000614240 HRH4Q9H3N8 390 aa13□□□□□ -0.33
SMN2-213ENST00000614240 APLNQ9ULZ1 77 aa13□□□□□ -0.33
SMN2-213ENST00000614240 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 APOA1P02647 267 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 SPP1P10451 314 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 PI3P19957 117 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 OPRK1P41145 380 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 ETV6P41212 452 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 P2RY1P47900 373 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 Q8NAQ8 132 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 YIPF6Q96EC8 236 aa12.99□□□□□ -0.33
SMN2-213ENST00000614240 GRAMD2BQ96HH9 432 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms