RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 KBTBD11-OT1A0A1B0GTJ5 212 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 SMIM6P0DI80 62 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 GTF3AQ92664 365 aaKnown RBP12.94□□□□□ -0.34
TNXB-209ENST00000613214 SPRR3Q9UBC9 169 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 FOXF2Q12947 444 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 ZNF345Q14585 488 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 TRAV8-2A0A0B4J237 113 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 NBR2O15453 112 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 MLNRO43193 412 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 IMMP1LQ96LU5 166 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
TNXB-209ENST00000613214 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
TNXB-209ENST00000613214 TIMM23O14925 209 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
TNXB-209ENST00000613214 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 DPRXA6NFQ7 191 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 PAPPA-AS1Q5QFB9 102 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 SLC25A28Q96A46 364 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 SMIM8Q96KF7 97 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 CGB3P0DN86 165 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 GATAD1Q8WUU5 269 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 RNASE6Q93091 150 aaKnown RBP12.93□□□□□ -0.34
TNXB-209ENST00000613214 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 FAM181AQ8N9Y4 354 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 TRBV5-3A0A0A0MS03 114 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 STPG2Q8N412 459 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 HIGD1CA8MV81 97 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
TNXB-209ENST00000613214 A0A0G2JK05 382 aa12.93□□□□□ -0.34
TNXB-209ENST00000613214 MRPS18AQ9NVS2 196 aaKnown RBP12.93□□□□□ -0.34
TNXB-209ENST00000613214 A0A087WX48 190 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 A0A1B0GV90 55 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
TNXB-209ENST00000613214 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
TNXB-209ENST00000613214 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 C19orf24Q9BVV8 132 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 IFI27P40305 119 aaPredicted RBP12.92□□□□□ -0.34
TNXB-209ENST00000613214 PLPPR1Q8TBJ4 325 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
TNXB-209ENST00000613214 SLC25A15Q9Y619 301 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 C2orf68Q2NKX9 166 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 KLHL30-AS1Q8NEE0 82 aa12.92□□□□□ -0.34
TNXB-209ENST00000613214 FAM110DQ8TAY7 271 aaPredicted RBP12.91□□□□□ -0.34
TNXB-209ENST00000613214 MBD3L1Q8WWY6 194 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 FOXD3Q9UJU5 478 aaPredicted RBP12.91□□□□□ -0.34
TNXB-209ENST00000613214 TRAV5A0A0B4J249 113 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 GATA4P43694 442 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 COQ2Q96H96 371 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 SDHCQ99643 169 aaPredicted RBP12.91□□□□□ -0.34
TNXB-209ENST00000613214 ZNF257Q9Y2Q1 563 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 LAMB2P55268 1798 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 A0A1B0GUT8 65 aa12.91□□□□□ -0.34
TNXB-209ENST00000613214 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 SELLP14151 372 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 IFITM3Q01628 133 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 ZNF48Q96MX3 618 aaPredicted RBP12.9□□□□□ -0.34
TNXB-209ENST00000613214 RCHY1Q96PM5 261 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 ANKRD36A6QL64 1941 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 DMRTC2Q8IXT2 367 aaPredicted RBP12.9□□□□□ -0.34
TNXB-209ENST00000613214 A0A1W2PR77 199 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 CD300EQ496F6 205 aaPredicted RBP12.9□□□□□ -0.34
TNXB-209ENST00000613214 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 SAXO1Q8IYX7 474 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 HIST1H4AP62805 103 aaKnown RBP12.9□□□□□ -0.34
TNXB-209ENST00000613214 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 LRP5O75197 1615 aa12.9□□□□□ -0.34
TNXB-209ENST00000613214 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 NHSL1Q5SYE7 1610 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
TNXB-209ENST00000613214 PAX8Q06710 450 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 SLC25A39Q9BZJ4 359 aaPredicted RBP12.89□□□□□ -0.35
TNXB-209ENST00000613214 NHP2Q9NX24 153 aaKnown RBP12.89□□□□□ -0.35
TNXB-209ENST00000613214 TRBV5-7A0A0A0MS05 114 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 IGHV1-18A0A0C4DH31 117 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 WNT2P09544 360 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 CGB7P0DN87 165 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 FCN3O75636 299 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
TNXB-209ENST00000613214 PAX1P15863 534 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 JPT2Q9H910 190 aa12.89□□□□□ -0.35
TNXB-209ENST00000613214 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
TNXB-209ENST00000613214 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
TNXB-209ENST00000613214 NCR2O95944 276 aa12.88□□□□□ -0.35
TNXB-209ENST00000613214 PI4KAP42356 2102 aa12.88□□□□□ -0.35
TNXB-209ENST00000613214 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
TNXB-209ENST00000613214 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
TNXB-209ENST00000613214 SAMD13Q5VXD3 122 aa12.88□□□□□ -0.35
TNXB-209ENST00000613214 GDF15Q99988 308 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms