RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
VCX3A-203ENST00000612369 LYL1P12980 280 aa13.65□□□□□ -0.22
VCX3A-203ENST00000612369 CASC10Q5T4H9 136 aa13.65□□□□□ -0.22
VCX3A-203ENST00000612369 LAMTOR1Q6IAA8 161 aa13.65□□□□□ -0.22
VCX3A-203ENST00000612369 SLC35G3Q8N808 338 aa13.65□□□□□ -0.22
VCX3A-203ENST00000612369 SPAG8Q99932 426 aaPredicted RBP13.65□□□□□ -0.22
VCX3A-203ENST00000612369 PRRT1Q99946 306 aa13.65□□□□□ -0.22
VCX3A-203ENST00000612369 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
VCX3A-203ENST00000612369 RSL24D1Q9UHA3 163 aaKnown RBP13.65□□□□□ -0.22
VCX3A-203ENST00000612369 DNAH7Q8WXX0 4024 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 RBMY1BA6NDE4 496 aaKnown RBP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 RBMY1EA6NEQ0 496 aaKnown RBP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 H3BMQ9 156 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 TSPAN4O14817 238 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 GSTZ1O43708 216 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 CDS2O95674 445 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 MT-CO2P00403 227 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 IFNA17P01571 189 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 RBMY1DP0C7P1 496 aaKnown RBP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 SNCAP37840 140 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 SUB1P53999 127 aaKnown RBP eCLIP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 IZUMO4Q1ZYL8 232 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 SP6Q3SY56 376 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 OR4C16Q8NGL9 310 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 SLIRPQ9GZT3 109 aaKnown RBP13.64□□□□□ -0.23
VCX3A-203ENST00000612369 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 WFDC10AQ9H1F0 79 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
VCX3A-203ENST00000612369 ST8SIA3O43173 380 aa13.63□□□□□ -0.23
VCX3A-203ENST00000612369 DHODHQ02127 395 aa13.63□□□□□ -0.23
VCX3A-203ENST00000612369 FAAP20Q6NZ36 180 aa13.63□□□□□ -0.23
VCX3A-203ENST00000612369 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
VCX3A-203ENST00000612369 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
VCX3A-203ENST00000612369 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
VCX3A-203ENST00000612369 GPR132Q9UNW8 380 aa13.63□□□□□ -0.23
VCX3A-203ENST00000612369 TEX13DA0A0J9YY54 714 aaPredicted RBP13.62□□□□□ -0.23
VCX3A-203ENST00000612369 ANKRD20A5PA0PJZ0 165 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 CORTO00230 105 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 PVRIGQ6DKI7 326 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 PINX1Q96BK5 328 aaKnown RBP13.62□□□□□ -0.23
VCX3A-203ENST00000612369 OR10C1Q96KK4 312 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 NXF2Q9GZY0 626 aaKnown RBP13.62□□□□□ -0.23
VCX3A-203ENST00000612369 NAA60Q9H7X0 242 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 ENY2Q9NPA8 101 aa13.62□□□□□ -0.23
VCX3A-203ENST00000612369 GNG7O60262 68 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 OR5AC1P0C628 307 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 TNFSF8P32971 234 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 NPBWR1P48145 328 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 AARDQ4LEZ3 155 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 SPINK9Q5DT21 86 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 MCFD2Q8NI22 146 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 RBPMSQ93062 196 aaKnown RBP13.61□□□□□ -0.23
VCX3A-203ENST00000612369 SCGB3A2Q96PL1 93 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 SOSTQ9BQB4 213 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-203ENST00000612369 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
VCX3A-203ENST00000612369 LOC102724200A0A096LPH7 203 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-203ENST00000612369 FABP12A6NFH5 140 aa13.6□□□□□ -0.23
VCX3A-203ENST00000612369 CRYM-AS1A6NIL9 109 aa13.6□□□□□ -0.23
VCX3A-203ENST00000612369 ETV6P41212 452 aa13.6□□□□□ -0.23
VCX3A-203ENST00000612369 HOXA1P49639 335 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-203ENST00000612369 OR51S1Q8NGJ8 323 aa13.6□□□□□ -0.23
VCX3A-203ENST00000612369 GGTLC1Q9BX51 225 aa13.6□□□□□ -0.23
VCX3A-203ENST00000612369 A0A0G2JRQ6 117 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 OR4C46A6NHA9 309 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 YIF1AO95070 293 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 RNASE2P10153 161 aaKnown RBP13.59□□□□□ -0.23
VCX3A-203ENST00000612369 SPCS3P61009 180 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 SELENOHQ8IZQ5 122 aaKnown RBP13.59□□□□□ -0.23
VCX3A-203ENST00000612369 ZNF414Q96IQ9 312 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 GINS3Q9BRX5 216 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 CACFD1Q9UGQ2 172 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 KCNIP3Q9Y2W7 256 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 TMEM56-RWDD3S4R434 201 aa13.59□□□□□ -0.23
VCX3A-203ENST00000612369 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 ZNF207O43670 478 aaKnown RBP13.58□□□□□ -0.24
VCX3A-203ENST00000612369 IGHV3-48P01763 117 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 CD5P06127 495 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 Q6ZRM9 215 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 LHFPL5Q8TAF8 219 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 IL22RA2Q969J5 263 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 GALNT14Q96FL9 552 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
VCX3A-203ENST00000612369 CHEK1O14757 476 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 TMEM50AO95807 157 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 BMI1P35226 326 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 TMEM268Q5VZI3 342 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 IL17DQ8TAD2 202 aa13.57□□□□□ -0.24
VCX3A-203ENST00000612369 RETNQ9HD89 108 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms