RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 LCN12Q6JVE5 192 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 PI4KAP42356 2102 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 MORN2Q502X0 79 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 MYOZ3Q8TDC0 251 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 PSPNO60542 156 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 MOSP00540 346 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 KIR2DL2P43627 348 aaPredicted RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 Q0VG73 95 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 UNQ6494/PRO21346Q6UXR6 183 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 Q6ZT83 130 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 LTBRP36941 435 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 CDKN1AP38936 164 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 TWIST1Q15672 202 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 OSR1Q8TAX0 266 aaPredicted RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 ONECUT1Q9UBC0 465 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 FER1L5A0AVI2 2057 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 KLF7O75840 302 aaPredicted RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 GPR183P32249 361 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 CLEC5AQ9NY25 188 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
VPS36-207ENST00000611132 ROS1P08922 2347 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 REG1AP05451 166 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 Q6P435 159 aa12.18□□□□□ -0.46
VPS36-207ENST00000611132 TSPOP30536 169 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 TCF24Q7RTU0 167 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 PPIAL4EA0A075B759 164 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 A0A1B0GUT8 65 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 PPIAL4DF5H284 164 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 TFF1P04155 84 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 PPIAL4FP0DN26 164 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 AREGP15514 252 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
VPS36-207ENST00000611132 PPIAL4AQ9Y536 164 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 SSC4DQ8WTU2 575 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 NTF4P34130 210 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 YPEL3P61236 119 aaPredicted RBP12.17□□□□□ -0.46
VPS36-207ENST00000611132 GAGE1Q13065 139 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 Q6ZWC4 215 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
VPS36-207ENST00000611132 IGKV1-39P01597 117 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 IGKV1D-39P04432 117 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 Q1RN00 199 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 CECR9P0C854 216 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 SMIM17P0DL12 118 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 ZNF414Q96IQ9 312 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 FBXL7Q9UJT9 491 aa12.16□□□□□ -0.46
VPS36-207ENST00000611132 UPK2O00526 184 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 CEACAM3P40198 252 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 RELQ04864 619 aaPredicted RBP12.15□□□□□ -0.46
VPS36-207ENST00000611132 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS36-207ENST00000611132 TSKUQ8WUA8 353 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 FOXH1O75593 365 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 PYYP10082 97 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 OR9G1Q8NH87 305 aa12.15□□□□□ -0.46
VPS36-207ENST00000611132 MRPL27Q9P0M9 148 aaKnown RBP12.15□□□□□ -0.46
VPS36-207ENST00000611132 SAA2-SAA4A0A096LPE2 208 aa12.15□□□□□ -0.47
VPS36-207ENST00000611132 IGHV1-69-2A0A0G2JMI3 117 aa12.15□□□□□ -0.47
VPS36-207ENST00000611132 LINC00473A8K010 186 aa12.15□□□□□ -0.47
VPS36-207ENST00000611132 SAA2P0DJI9 122 aaPredicted RBP12.15□□□□□ -0.47
VPS36-207ENST00000611132 BMI1P35226 326 aa12.15□□□□□ -0.47
VPS36-207ENST00000611132 MAP1LC3AQ9H492 121 aa12.15□□□□□ -0.47
VPS36-207ENST00000611132 PINLYPA6NC86 204 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 GNG5P63218 68 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 HIST1H1AQ02539 215 aaPredicted RBP12.14□□□□□ -0.47
VPS36-207ENST00000611132 CD69Q07108 199 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
VPS36-207ENST00000611132 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 FMC1Q96HJ9 113 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 AMMECR1LQ6DCA0 310 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 RASL11AQ6T310 242 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 NUDT10Q8NFP7 164 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 NUDT11Q96G61 164 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
VPS36-207ENST00000611132 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
VPS36-207ENST00000611132 A0A1W2PS18 150 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms